CFinderM000918's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
GT48 GlycosylTransferases0.009620488GFam
RLK-Pelle_RLCK-V (from iTAK)0.013810015GFam
TKL-Pl-4 (from iTAK)0.015189657GFam
microtubule cytoskeleton organization,0.015764577GO:0000226
(1->3)-beta-D-glucan biosynthetic process,0.015764577GO:0006075
cytokinesis0.015764577GO:0000910
1,3-beta-D-glucan synthase complex,0.016372442GO:0000148
mRNA_surveillance_pathway0.0255358KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000125G1100glucan synthase-like 12AT5G13000 (0)
PH01000312G0990protein phosphatase 2A-4AT3G58500 (2.00E-172)
PH01000448G0060Protein kinase superfamily proteinAT2G42960 (1.00E-169)
PH01000475G0470microtubule-associated proteins 65-1AT5G55230 (0.00E+00)
PH01000501G0350Protein of unknown function (DUF962)AT1G18720 (1.80E-34)
PH01002819G0050Plant protein of unknown function (DUF827)AT2G38370 (8.40E-63)
PH01003914G0150Protein kinase superfamily proteinAT3G01490 (3.60E-81)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000521protein complex,
microtubule,
cytokinesis
microtubule cytoskeleton organization,
protein polymerization,
microtubule-based process,
AGC_RSK-2 (from iTAK)
details
CFinderM000536SET Transcription_Regulator(from iTAK)
Others Transcription_Regulator(from iTAK)
details
CFinderM000574Others Transcription_Regulator(from iTAK)
signal transduction,
details
CFinderM000887SWI/SNF-BAF60b Transcription_Regulator(from iTAK)
histone modification,
transcription initiation, DNA-dependent,
details
CFinderM000906HSF Transcription_Regulator(from PlantTFDB)
protein ADP-ribosylation,
dephosphorylation,
protein methylation,
Base_excision_repair
details
CFinderM001000microtubule cytoskeleton organization,
cytokinesis
GTnc GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
RLK-Pelle_LRR-V (from iTAK)
details
CFinderM001330selenium binding,
dephosphorylation,
protein tyrosine/serine/threonine phosphatase activity,
protein tyrosine phosphatase activity,
Endocytosis
mRNA_surveillance_pathway
phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
details
CFinderM001341RLK-Pelle_LRR-II (from iTAK)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
microtubule associated complex,
protein phosphorylation,
microtubule-based movement,
details
CFinderM001399RNA_transport
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
Base_excision_repair
details
CFinderM001537vacuolar proton-transporting V-type ATPase, V1 domain,
ATP hydrolysis coupled proton transport,
MYB_related Transcription_Regulator(from PlantTFDB)
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001560HB-KNOX Transcription_Regulator(from iTAK)
GT48 GlycosylTransferases
details
CFinderM001561GT48 GlycosylTransferases
HB-KNOX Transcription_Regulator(from iTAK)
TKL-Pl-6 (from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
1,3-beta-D-glucan synthase complex,
details
CFinderM001752spindle pole,
microtubule organizing center,
STE_STE11 (from iTAK)
microtubule cytoskeleton organization,
mRNA_surveillance_pathway
details
CFinderM001845protein complex,
microtubule,
PLATZ Transcription_Regulator(from iTAK)
Phagosome
mRNA_surveillance_pathway
CAMK_CAMKL-CHK1 (from iTAK)
protein polymerization,
microtubule-based process,
dephosphorylation,
details
CFinderM001858RLK-Pelle_RLCK-V (from iTAK)
katanin_complex
Endocytosis
microtubule_severing
details
CFinderM001878isoprenoid biosynthetic process,
mRNA_surveillance_pathway
C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
details
CFinderM001886Steroid_biosynthesis
ubiquitin ligase complex,
sterol_24-C-methyltransferase_activity
dephosphorylation,
steroid biosynthetic process,
mRNA_surveillance_pathway
protein ubiquitination,
protein dephosphorylation,
details
CFinderM001897phosphatase activity,
mRNA_surveillance_pathway
dephosphorylation,
protein dephosphorylation,
protein ubiquitination,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
ubiquitin ligase complex,
details

4.Expression profilings