CFinderM001845's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
protein complex,0.011776008GO:0043234
microtubule,0.011776008GO:0005874
PLATZ Transcription_Regulator(from iTAK)0.018217205GFam
Phagosome0.038303701KEGG
mRNA_surveillance_pathway0.038303701KEGG
CAMK_CAMKL-CHK1 (from iTAK)0.04537255GFam
protein polymerization,0.047496567GO:0051258
microtubule-based process,0.047496567GO:0007017
dephosphorylation,0.047496567GO:0016311

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000101G0880alpha-1 tubulinAT1G64740 (0.00E+00)
PH01000227G0580CBL-interacting protein kinase 2AT5G07070 (2.00E-137)
PH01000312G0990protein phosphatase 2A-4AT3G58500 (2.00E-172)
PH01000659G0750-- (-)
PH01000790G0590dual specificity protein phosphatase family proteinAT5G23720 (1.00E-180)
PH01001250G0020PLATZ transcription factor family proteinAT1G32700 (3.50E-79)
PH01001525G0260BIG PETAL PAT1G59640 (2.10E-40)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000906HSF Transcription_Regulator(from PlantTFDB)
protein ADP-ribosylation,
dephosphorylation,
protein methylation,
Base_excision_repair
details
CFinderM000918GT48 GlycosylTransferases
RLK-Pelle_RLCK-V (from iTAK)
TKL-Pl-4 (from iTAK)
microtubule cytoskeleton organization,
(1->3)-beta-D-glucan biosynthetic process,
cytokinesis
1,3-beta-D-glucan synthase complex,
mRNA_surveillance_pathway
details
CFinderM001214PLATZ Transcription_Regulator(from iTAK)
RLK-Pelle_LRR-VII-2 (from iTAK)
protein complex,
microtubule,
microtubule-based process,
translational initiation,
protein polymerization,
RLK-Pelle_DLSV (from iTAK)
Phagosome
RNA_transport
details
CFinderM001226protein complex,
microtubule,
translational initiation,
microtubule-based process,
protein polymerization,
GTP_catabolic_process
Phagosome
RNA_transport
details
CFinderM001329Endocytosis
selenium binding,
dephosphorylation,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
details
CFinderM001330selenium binding,
dephosphorylation,
protein tyrosine/serine/threonine phosphatase activity,
protein tyrosine phosphatase activity,
Endocytosis
mRNA_surveillance_pathway
phosphatase activity,
protein dephosphorylation,
cell redox homeostasis,
details
CFinderM001331protein dephosphorylation,
microtubule organizing center,
spindle pole,
dephosphorylation,
microtubule cytoskeleton organization,
C2H2 Transcription_Regulator(from PlantTFDB)
isoprenoid biosynthetic process,
selenium binding,
details
CFinderM001545regulation of Rab GTPase activity,
PLATZ Transcription_Regulator(from iTAK)
details
CFinderM001698Steroid_biosynthesis
endodeoxyribonuclease activity, producing 5'-phosphomonoesters,
sterol_24-C-methyltransferase_activity
single-stranded DNA binding,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
WRKY Transcription_Regulator(from PlantTFDB)
dephosphorylation,
steroid biosynthetic process,
details
CFinderM001833CMGC_GSK (from iTAK)
PLATZ Transcription_Regulator(from iTAK)
nucleosome,
nucleosome assembly,
details
CFinderM001843Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
PLATZ Transcription_Regulator(from iTAK)
protein complex,
microtubule,
TRAF Transcription_Regulator(from iTAK)
branched chain family amino acid metabolic process,
branched-chain-amino-acid transaminase activity,
protein polymerization,
translational initiation,
microtubule-based process,
Pantothenate_and_CoA_biosynthesis
structural constituent of cytoskeleton,
details
CFinderM001844PLATZ Transcription_Regulator(from iTAK)
TRAF Transcription_Regulator(from iTAK)
microtubule,
protein complex,
Plant_hormone_signal_transduction
Phagosome
protein polymerization,
microtubule-based process,
details
CFinderM001878isoprenoid biosynthetic process,
mRNA_surveillance_pathway
C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
details
CFinderM001886Steroid_biosynthesis
ubiquitin ligase complex,
sterol_24-C-methyltransferase_activity
dephosphorylation,
steroid biosynthetic process,
mRNA_surveillance_pathway
protein ubiquitination,
protein dephosphorylation,
details
CFinderM001897phosphatase activity,
mRNA_surveillance_pathway
dephosphorylation,
protein dephosphorylation,
protein ubiquitination,
protein tyrosine phosphatase activity,
protein tyrosine/serine/threonine phosphatase activity,
ubiquitin ligase complex,
details

4.Expression profilings