CFinderM001214's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
PLATZ Transcription_Regulator(from iTAK)0.005153752GFam
RLK-Pelle_LRR-VII-2 (from iTAK)0.005153752GFam
protein complex,0.010099556GO:0043234
microtubule,0.010099556GO:0005874
microtubule-based process,0.025622948GO:0007017
translational initiation,0.025622948GO:0006413
protein polymerization,0.025622948GO:0051258
RLK-Pelle_DLSV (from iTAK)0.038851571GFam
Phagosome0.044179879KEGG
RNA_transport0.044179879KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000101G0880alpha-1 tubulinAT1G64740 (0.00E+00)
PH01000338G0680Leucine-rich repeat transmembrane protein kinaseAT1G56130 (0.00E+00)
PH01000664G0050DHHC-type zinc finger family proteinAT4G24630 (8.00E-130)
PH01001250G0020PLATZ transcription factor family proteinAT1G32700 (3.50E-79)
PH01002385G0030eukaryotic translation initiation factor 2 beta subunitAT5G20920 (9.90E-93)
PH01002775G0150Leucine-rich repeat protein kinase family proteinAT5G45800 (4.80E-61)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM001226protein complex,
microtubule,
translational initiation,
microtubule-based process,
protein polymerization,
GTP_catabolic_process
Phagosome
RNA_transport
details
CFinderM001284Alanine,_aspartate_and_glutamate_metabolism
RNA_transport
arginine biosynthetic process via ornithine,
argininosuccinate lyase activity,
translational initiation,
Arginine_and_proline_metabolism
details
CFinderM001545regulation of Rab GTPase activity,
PLATZ Transcription_Regulator(from iTAK)
details
CFinderM001587Valine,_leucine_and_isoleucine_biosynthesis
Valine,_leucine_and_isoleucine_degradation
nucleoside_diphosphate_phosphorylation
branched chain family amino acid metabolic process,
CTP biosynthetic process,
GTP biosynthetic process,
UTP biosynthetic process,
nucleoside diphosphate kinase activity,
branched-chain-amino-acid transaminase activity,
Pantothenate_and_CoA_biosynthesis
details
CFinderM001833CMGC_GSK (from iTAK)
PLATZ Transcription_Regulator(from iTAK)
nucleosome,
nucleosome assembly,
details
CFinderM001843Valine,_leucine_and_isoleucine_degradation
Valine,_leucine_and_isoleucine_biosynthesis
PLATZ Transcription_Regulator(from iTAK)
protein complex,
microtubule,
TRAF Transcription_Regulator(from iTAK)
branched chain family amino acid metabolic process,
branched-chain-amino-acid transaminase activity,
protein polymerization,
translational initiation,
microtubule-based process,
Pantothenate_and_CoA_biosynthesis
structural constituent of cytoskeleton,
details
CFinderM001844PLATZ Transcription_Regulator(from iTAK)
TRAF Transcription_Regulator(from iTAK)
microtubule,
protein complex,
Plant_hormone_signal_transduction
Phagosome
protein polymerization,
microtubule-based process,
details
CFinderM001845protein complex,
microtubule,
PLATZ Transcription_Regulator(from iTAK)
Phagosome
mRNA_surveillance_pathway
CAMK_CAMKL-CHK1 (from iTAK)
protein polymerization,
microtubule-based process,
dephosphorylation,
details

4.Expression profilings