PH01001298G0150's details annotation
1.Annotation
ICBR annotation: cytochrome P450 51, putative, expressed
Blast result AT1G11680 : 0.00E+00
Blast annotation: CYTOCHROME P450 51G1
2.Location
Scaffold: PH01001298
Strand: +
| Region | Start | End |
| gene | 77836 | 82169 |
| mRNA | 77836 | 82169 |
| exon | 77836 | 78981 |
| exon | 80601 | 82169 |
| CDS | 78490 | 78981 |
| CDS | 80601 | 81602 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001316 | SNF2 Transcription_Regulator(from iTAK) helicase activity, ATP-dependent helicase activity, ATP binding, monooxygenase activity, fructose-bisphosphate aldolase activity, DNA binding, protein catabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00067.21 | p450 | 38 | 465 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Steroid biosynthesis | cytochrome P450, family 51 (sterol 14-demethylase) [EC:1.14.13.7] | ko00100 | K05917 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004497 | monooxygenase activity |
| GO:0005506 | iron ion binding |
| GO:0009055 | electron carrier activity |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.