CFinderM001316's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
SNF2 Transcription_Regulator(from iTAK)1.33E-07GFam
helicase activity,0.013912812GO:0004386
ATP-dependent helicase activity,0.013912812GO:0008026
ATP binding,0.023094524GO:0005524
monooxygenase activity,0.023568423GO:0004497
fructose-bisphosphate aldolase activity,0.023568423GO:0004332
DNA binding,0.023568423GO:0003677
protein catabolic process,0.043178697GO:0030163

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000031G1210Aldolase superfamily proteinAT2G36460 (2.00E-170)
PH01000056G1180chromatin remodeling 5AT2G13370 (2.00E-176)
PH01000056G1200chromatin remodeling 5AT2G13370 (6.40E-89)
PH01000056G1370chromatin remodeling 5AT2G13370 (0.00E+00)
PH01000277G0280regulatory particle triple-A ATPase 3AT5G58290 (0.00E+00)
PH01000860G0270Mitochondrial substrate carrier family proteinAT4G11440 (3.30E-62)
PH01001298G0150CYTOCHROME P450 51G1AT1G11680 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000112SNF2 Transcription_Regulator(from iTAK)
chromatin remodeling,
ATP-dependent chromatin remodeling,
CE8 Carbohydrate_Esterases
nucleic acid binding,
helicase activity,
5'-3' exoribonuclease activity,
nucleosome binding,
GT1 GlycosylTransferases
cell wall modification,
nucleus,
cell wall,
nucleobase-containing compound metabolic process,
exonuclease activity,
details
CFinderM000151SNF2 Transcription_Regulator(from iTAK)
response to oxidative stress,
ATP-dependent helicase activity,
helicase activity,
peroxidase activity,
heme binding,
oxidation-reduction process,
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
Methane_metabolism
nucleic acid binding,
details
CFinderM000818SNF2 Transcription_Regulator(from iTAK)
GTP binding,
Protein_processing_in_endoplasmic_reticulum
intracellular protein transport,
details
CFinderM001238glycolysis,
fructose-bisphosphate aldolase activity,
Fructose_and_mannose_metabolism
Methane_metabolism
Carbon_fixation_in_photosynthetic_organisms
Glycolysis_/_Gluconeogenesis
Pentose_phosphate_pathway
details
CFinderM001782ubiquitin-dependent protein catabolic process,
ubiquitin thiolesterase activity,
mechanically-gated_ion_channel_activity
SNF2 Transcription_Regulator(from iTAK)
details

4.Expression profilings