Gene details

Annotation of co-expression genes

PH01001395G0350's details annotation

1.Annotation

ICBR annotation: decarboxylase, putative, expressed

Blast result AT2G20340 : 7.80E-95
Blast annotation: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

2.Location

Scaffold: PH01001395
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000424	carboxylic acid metabolic process, carboxy-lyase activity, cellular amino acid metabolic process, RLK-Pelle_LRR-Xa (from iTAK) pyridoxal phosphate binding, Ascorbate_and_aldarate_metabolism Glutathione_metabolism

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00282.18	Pyridoxal_deC	1	238

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0006520	cellular amino acid metabolic process
GO:0016831	carboxy-lyase activity
GO:0019752	carboxylic acid metabolic process
GO:0030170	pyridoxal phosphate binding

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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