PH01001428G0260's details annotation
1.Annotation
ICBR annotation: methyltransferase, putative, expressed
Blast result AT4G14360 : 0.00E+00
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01001428
Strand: -
| Region | Start | End |
| gene | 175136 | 181082 |
| mRNA | 175136 | 181082 |
| exon | 175136 | 175731 |
| exon | 176651 | 176871 |
| exon | 176991 | 177103 |
| exon | 178893 | 179487 |
| exon | 179607 | 179789 |
| exon | 180161 | 180325 |
| exon | 180420 | 181082 |
| CDS | 175410 | 175731 |
| CDS | 176651 | 176871 |
| CDS | 176991 | 177103 |
| CDS | 178893 | 179487 |
| CDS | 179607 | 179789 |
| CDS | 180161 | 180325 |
| CDS | 180420 | 180671 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001136 | regulation of ARF protein signal transduction, DNA integration, ARF guanyl-nucleotide exchange factor activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03141.15 | Methyltransf_29 | 92 | 603 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.