|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | regulation of ARF protein signal transduction, | 0.007205901 | GO:0032012 | | DNA integration, | 0.007205901 | GO:0015074 | | ARF guanyl-nucleotide exchange factor activity, | 0.032435716 | GO:0005086 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000017G1560 | Major facilitator superfamily protein | AT1G64650 (0.00E+00) | | PH01000967G0490 | Plant protein of unknown function (DUF869) | AT1G19835 (5.00E-175) | | PH01001215G0340 | Major facilitator superfamily protein | AT1G64650 (0) | | PH01001363G0510 | SEC7-like guanine nucleotide exchange family protein | AT1G01960 (3.90E-82) | | PH01001363G0520 | SEC7-like guanine nucleotide exchange family protein | AT3G60860 (0.00E+00) | | PH01001428G0260 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | AT4G14360 (0.00E+00) | | PH01002230G0270 | RNA binding;abscisic acid binding | AT4G16280 (5.10E-90) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000013 | cellulose biosynthetic process,
cellulose synthase (UDP-forming) activity,
response to oxidative stress,
extracellular polysaccharide biosynthetic process,
hydrolase activity, hydrolyzing O-glycosyl compounds,
carbohydrate metabolic process,
| details | | CFinderM000372 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
L-phenylalanine biosynthetic process,
regulation of ARF GTPase activity,
Endocytosis
| details | | CFinderM000783 | carbohydrate metabolic process,
CE13 Carbohydrate_Esterases
hydrolase activity, hydrolyzing O-glycosyl compounds,
| details | | CFinderM001027 | RLK-Pelle_SD-2b (from iTAK)
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
Methane_metabolism
| details | | CFinderM001073 | | details | | CFinderM001114 | MYB Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001135 | | details | | CFinderM001196 | nitronate monooxygenase activity,
intramolecular transferase activity,
| details | | CFinderM001255 | GT77 GlycosylTransferases
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
succinate-CoA ligase (ADP-forming) activity,
ATP citrate synthase activity,
Carbon_fixation_pathways_in_prokaryotes
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
prephenate dehydratase activity,
Citrate_cycle_(TCA_cycle)
| details | | CFinderM001475 | cellulose biosynthetic process,
intramolecular transferase activity,
| details | | CFinderM001784 | RLK-Pelle_RLCK-V (from iTAK)
COPI vesicle coat,
membrane coat,
Spliceosome
| details |
4.Expression profilings |
