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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | cellulose biosynthetic process, | 0.000347955 | GO:0030244 | | cellulose synthase (UDP-forming) activity, | 0.000539708 | GO:0016760 | | response to oxidative stress, | 0.044343908 | GO:0006979 | | extracellular polysaccharide biosynthetic process, | 0.044343908 | GO:0045226 | | hydrolase activity, hydrolyzing O-glycosyl compounds, | 0.047858723 | GO:0004553 | | carbohydrate metabolic process, | 0.048099818 | GO:0005975 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000002 | extracellular region,
plant-type cell wall organization,
sexual reproduction,
glycerol metabolic process,
| details | | CFinderM000055 | hydrolase activity, hydrolyzing O-glycosyl compounds,
carbohydrate metabolic process,
GH3 Glycoside_Hydrolases
hydrolase activity,
| details | | CFinderM000103 | plant-type cell wall organization,
extracellular region,
microtubule-based movement,
microtubule associated complex,
| details | | CFinderM000157 | RNA_transport
mRNA_surveillance_pathway
| details | | CFinderM000161 | Methane_metabolism
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
response to oxidative stress,
peroxidase activity,
heme binding,
cellulose biosynthetic process,
| details | | CFinderM000342 | ERF Transcription_Regulator(from PlantTFDB)
AP2/ERF-ERF Transcription_Regulator(from iTAK)
| details | | CFinderM000372 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
L-phenylalanine biosynthetic process,
regulation of ARF GTPase activity,
Endocytosis
| details | | CFinderM000378 | extracellular region,
sexual reproduction,
RNA_transport
mRNA_surveillance_pathway
| details | | CFinderM000469 | CCAAT-binding factor complex,
NF-YA Transcription_Regulator(from PlantTFDB)
response to biotic stimulus,
| details | | CFinderM000515 | intracellular,
| details | | CFinderM000528 | RLK-Pelle_RLCK-XIII (from iTAK)
base-excision repair,
Base_excision_repair
DNA-3-methyladenine glycosylase activity,
| details | | CFinderM000529 | RLK-Pelle_Extensin (from iTAK)
RLK-Pelle_RLCK-XIII (from iTAK)
| details | | CFinderM000547 | bZIP Transcription_Regulator(from PlantTFDB)
intramolecular transferase activity,
| details | | CFinderM000613 | GH3 Glycoside_Hydrolases
apoplast,
nuclear pore,
integral to membrane,
manganese ion binding,
protein transporter activity,
nutrient reservoir activity,
| details | | CFinderM000689 | hydrolase activity, acting on ester bonds,
lipid metabolic process,
hydrolase activity,
RLK-Pelle_Extensin (from iTAK)
lipase activity,
lipid transport,
| details | | CFinderM000782 | cellulose biosynthetic process,
cellulose synthase (UDP-forming) activity,
chaperone binding,
AP2/ERF-ERF Transcription_Regulator(from iTAK)
ERF Transcription_Regulator(from PlantTFDB)
integral to membrane,
membrane,
| details | | CFinderM000783 | carbohydrate metabolic process,
CE13 Carbohydrate_Esterases
hydrolase activity, hydrolyzing O-glycosyl compounds,
| details | | CFinderM000784 | carbohydrate metabolic process,
GH3 Glycoside_Hydrolases
hydrolase activity, hydrolyzing O-glycosyl compounds,
integral to membrane,
polygalacturonase activity,
| details | | CFinderM000832 | Sphingolipid_metabolism
AUX/IAA Transcription_Regulator(from iTAK)
| details | | CFinderM000975 | GTnc GlycosylTransferases
tRNA (guanine-N1-)-methyltransferase activity,
tRNA methylation,
chitin catabolic process,
cell wall macromolecule catabolic process,
chaperone binding,
chitinase activity,
transferase activity,
| details | | CFinderM001027 | RLK-Pelle_SD-2b (from iTAK)
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
Methane_metabolism
| details | | CFinderM001073 | | details | | CFinderM001114 | MYB Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001135 | | details | | CFinderM001136 | regulation of ARF protein signal transduction,
DNA integration,
ARF guanyl-nucleotide exchange factor activity,
| details | | CFinderM001196 | nitronate monooxygenase activity,
intramolecular transferase activity,
| details | | CFinderM001255 | GT77 GlycosylTransferases
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
succinate-CoA ligase (ADP-forming) activity,
ATP citrate synthase activity,
Carbon_fixation_pathways_in_prokaryotes
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
prephenate dehydratase activity,
Citrate_cycle_(TCA_cycle)
| details | | CFinderM001276 | GT8 GlycosylTransferases
plant-type cell wall organization,
extracellular region,
| details | | CFinderM001277 | plant-type cell wall organization,
Ether_lipid_metabolism
Glycerophospholipid_metabolism
Endocytosis
extracellular region,
| details | | CFinderM001475 | cellulose biosynthetic process,
intramolecular transferase activity,
| details | | CFinderM001601 | GH35 Glycoside_Hydrolases
| details | | CFinderM001609 | RNA_transport
mRNA_surveillance_pathway
| details | | CFinderM001784 | RLK-Pelle_RLCK-V (from iTAK)
COPI vesicle coat,
membrane coat,
Spliceosome
| details |
4.Expression profilings |
