CFinderM000469's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CCAAT-binding factor complex,0.003931966GO:0016602
NF-YA Transcription_Regulator(from PlantTFDB)0.005570807GFam
response to biotic stimulus,0.007216719GO:0009607

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000035G1760MLP-like protein 423AT1G24020 (1.40E-34)
PH01000129G0560-AT4G08910 (3.00E-11)
PH01000561G0620Smg-4/UPF3 family proteinAT1G33980 (1.30E-76)
PH01000855G0230nuclear factor Y, subunit A10AT5G06510 (1.30E-28)
PH01001271G0230Protein of unknown function, DUF538AT1G09310 (1.60E-30)
PH01002098G0210vacuolar iron transporter 1AT2G01770 (3.60E-40)
PH01002132G0200Polyketide cyclase/dehydrase and lipid transport superfamily proteinAT2G25770 (1.90E-19)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000002extracellular region,
plant-type cell wall organization,
sexual reproduction,
glycerol metabolic process,
details
CFinderM000013cellulose biosynthetic process,
cellulose synthase (UDP-forming) activity,
response to oxidative stress,
extracellular polysaccharide biosynthetic process,
hydrolase activity, hydrolyzing O-glycosyl compounds,
carbohydrate metabolic process,
details
CFinderM000103plant-type cell wall organization,
extracellular region,
microtubule-based movement,
microtubule associated complex,
details
CFinderM000157RNA_transport
mRNA_surveillance_pathway
details
CFinderM000161Methane_metabolism
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
response to oxidative stress,
peroxidase activity,
heme binding,
cellulose biosynthetic process,
details
CFinderM000342ERF Transcription_Regulator(from PlantTFDB)
AP2/ERF-ERF Transcription_Regulator(from iTAK)
details
CFinderM000376GT77 GlycosylTransferases
Valine,_leucine_and_isoleucine_degradation
Cutin,_suberine_and_wax_biosynthesis
response to biotic stimulus,
cellular aldehyde metabolic process,
Propanoate_metabolism
Tryptophan_metabolism
Limonene_and_pinene_degradation
Lysine_degradation
Chloroalkane_and_chloroalkene_degradation
Histidine_metabolism
beta-Alanine_metabolism
Glycerolipid_metabolism
Ascorbate_and_aldarate_metabolism
Pentose_and_glucuronate_interconversions
Fatty_acid_metabolism
details
CFinderM000378extracellular region,
sexual reproduction,
RNA_transport
mRNA_surveillance_pathway
details
CFinderM000528RLK-Pelle_RLCK-XIII (from iTAK)
base-excision repair,
Base_excision_repair
DNA-3-methyladenine glycosylase activity,
details
CFinderM000529RLK-Pelle_Extensin (from iTAK)
RLK-Pelle_RLCK-XIII (from iTAK)
details
CFinderM000689hydrolase activity, acting on ester bonds,
lipid metabolic process,
hydrolase activity,
RLK-Pelle_Extensin (from iTAK)
lipase activity,
lipid transport,
details
CFinderM001601GH35 Glycoside_Hydrolases
details
CFinderM001609RNA_transport
mRNA_surveillance_pathway
details

4.Expression profilings