CFinderM001114's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
MYB Transcription_Regulator(from PlantTFDB)0.032616523GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000000G6090Protein of unknown function (DUF3741)AT4G00440 (1.10E-24)
PH01000110G0260SAUR-like auxin-responsive protein family AT3G12955 (2.20E-16)
PH01000272G0180Protein of unknown function (DUF3741)AT4G00440 (2.60E-36)
PH01000580G0180-AT5G61340 (5.20E-25)
PH01002230G0270RNA binding;abscisic acid bindingAT4G16280 (5.10E-90)
PH01003918G0100myb domain protein 61AT1G09540 (2.40E-77)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000013cellulose biosynthetic process,
cellulose synthase (UDP-forming) activity,
response to oxidative stress,
extracellular polysaccharide biosynthetic process,
hydrolase activity, hydrolyzing O-glycosyl compounds,
carbohydrate metabolic process,
details
CFinderM000372Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
L-phenylalanine biosynthetic process,
regulation of ARF GTPase activity,
Endocytosis
details
CFinderM000518MYB Transcription_Regulator(from PlantTFDB)
details
CFinderM000783carbohydrate metabolic process,
CE13 Carbohydrate_Esterases
hydrolase activity, hydrolyzing O-glycosyl compounds,
details
CFinderM001027RLK-Pelle_SD-2b (from iTAK)
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
Methane_metabolism
details
CFinderM001073details
CFinderM001113HB-KNOX Transcription_Regulator(from iTAK)
HB-other Transcription_Regulator(from PlantTFDB)
cytokinesis
microtubule cytoskeleton organization,
microtubule binding,
details
CFinderM001135details
CFinderM001136regulation of ARF protein signal transduction,
DNA integration,
ARF guanyl-nucleotide exchange factor activity,
details
CFinderM001196nitronate monooxygenase activity,
intramolecular transferase activity,
details
CFinderM001255GT77 GlycosylTransferases
Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
succinate-CoA ligase (ADP-forming) activity,
ATP citrate synthase activity,
Carbon_fixation_pathways_in_prokaryotes
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer,
prephenate dehydratase activity,
Citrate_cycle_(TCA_cycle)
details
CFinderM001475cellulose biosynthetic process,
intramolecular transferase activity,
details
CFinderM001784RLK-Pelle_RLCK-V (from iTAK)
COPI vesicle coat,
membrane coat,
Spliceosome
details

4.Expression profilings