PH01001493G0410's details annotation 1.Annotation ICBR annotation: beta-galactosidase precursor, putative
Blast result AT1G31740 : 2.40E-54 Blast annotation: beta-galactosidase 15 2.Location Scaffold: PH01001493 Strand: - Region | Start | End | gene | 252675 | 263835 | mRNA | 252675 | 263835 | exon | 252675 | 252844 | exon | 252937 | 252998 | exon | 253283 | 253371 | exon | 253478 | 253630 | exon | 253719 | 253811 | exon | 253914 | 253980 | exon | 255014 | 255205 | exon | 255307 | 255392 | exon | 256060 | 256276 | exon | 256732 | 256784 | exon | 257038 | 257103 | exon | 259013 | 259171 | exon | 259272 | 259484 | exon | 259557 | 259603 | exon | 261495 | 261620 | exon | 263255 | 263360 | exon | 263474 | 263569 | exon | 263629 | 263835 | CDS | 252750 | 252844 | CDS | 252937 | 252998 | CDS | 253283 | 253371 | CDS | 253478 | 253630 | CDS | 253719 | 253811 | CDS | 253914 | 253980 | CDS | 255014 | 255205 | CDS | 255307 | 255392 | CDS | 256060 | 256276 | CDS | 256732 | 256784 | CDS | 257038 | 257103 | CDS | 259013 | 259171 | CDS | 259272 | 259484 | CDS | 259557 | 259603 | CDS | 261495 | 261620 | CDS | 263255 | 263360 | CDS | 263474 | 263569 | CDS | 263629 | 263784 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000687 | Ubiquitin_mediated_proteolysis GH35 Glycoside_Hydrolases
cullin-RING ubiquitin ligase complex, Nucleotide_excision_repair metallocarboxypeptidase activity,
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Glycoside_Hydrolases | GH35 |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF01301.18 | Glyco_hydro_35 | 30 | 93 | PF01301.18 | Glyco_hydro_35 | 507 | 640 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003824 | catalytic activity | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | GO:0005975 | carbohydrate metabolic process |
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