PH01001502G0010's details annotation
1.Annotation
ICBR annotation: TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
Blast result AT3G51550 : 0.00E+00
Blast annotation: Malectin/receptor-like protein kinase family protein
2.Location
Scaffold: PH01001502
Strand: -
| Region | Start | End |
| gene | 8687 | 12745 |
| mRNA | 8687 | 12745 |
| exon | 8687 | 12745 |
| CDS | 9546 | 12248 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000201 | RLK-Pelle_CrRLK1L-1 (from iTAK) 5'-3' exoribonuclease activity, nucleobase-containing compound metabolic process, Ribosome_biogenesis_in_eukaryotes RNA_degradation |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12819.6 | Malectin_like | 56 | 424 |
| PF07714.16 | Pkinase_Tyr | 552 | 815 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.