Gene details

Annotation of co-expression genes

PH01001513G0480's details annotation

1.Annotation

ICBR annotation: PPR repeat domain containing protein, putative, expressed

Blast result AT1G76280 : 2.00E-172
Blast annotation: Tetratricopeptide repeat (TPR)-like superfamily protein

2.Location

Scaffold: PH01001513
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001066	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), vesicle docking, ATP metabolic process, ATP_catabolic_process ATP biosynthetic process, proton transport, exocytosis,
coexpression network	CFinderM001596	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), malic enzyme activity, malate_dehydrogenase_(decarboxylating)_(NAD+)_activity ATP_catabolic_process ATP biosynthetic process, ATP metabolic process, malate metabolic process, proton transport, Protein_processing_in_endoplasmic_reticulum
coexpression network	CFinderM001712	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), Aminoacyl-tRNA_biosynthesis ATP_catabolic_process valyl-tRNA aminoacylation, ATP biosynthetic process, ATP metabolic process, G-protein coupled receptor signaling pathway, G-protein_beta/gamma-subunit_complex_binding guanyl nucleotide binding, valine-tRNA ligase activity, aminoacyl-tRNA_editing_activity proton transport,
coexpression network	CFinderM001889	GT66 GlycosylTransferases mitochondrial proton-transporting ATP synthase complex, catalytic core F(1), oligosaccharyl transferase activity, ATP_catabolic_process ATP biosynthetic process, ATP metabolic process, proton transport, Protein_processing_in_endoplasmic_reticulum protein glycosylation,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
GO:0005524	ATP binding
GO:0006200	ATP catabolic process
GO:0006754	ATP biosynthetic process
GO:0015992	proton transport
GO:0016887	ATPase activity
GO:0046034	ATP metabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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