PH01001587G0100's details annotation 1.Annotation ICBR annotation: NUC189 domain containing protein, expressed
Blast result AT5G11240 : 6.00E-140 Blast annotation: transducin family protein / WD-40 repeat family protein 2.Location Scaffold: PH01001587 Strand: + Region | Start | End | gene | 75140 | 81291 | mRNA | 75140 | 81291 | exon | 75140 | 75534 | exon | 75564 | 75704 | exon | 75787 | 75905 | exon | 76075 | 76229 | exon | 77004 | 77092 | exon | 77201 | 77735 | exon | 78049 | 78219 | exon | 78551 | 78732 | exon | 78866 | 78945 | exon | 79027 | 79135 | exon | 80454 | 80528 | exon | 80626 | 81291 | CDS | 75382 | 75534 | CDS | 75564 | 75704 | CDS | 75787 | 75905 | CDS | 76075 | 76229 | CDS | 77004 | 77092 | CDS | 77201 | 77735 | CDS | 78049 | 78219 | CDS | 78551 | 78732 | CDS | 78866 | 78945 | CDS | 79027 | 79135 | CDS | 80454 | 80528 | CDS | 80626 | 80787 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000852 | ATP-dependent helicase activity, helicase activity, membrane coat, Ribosome_biogenesis_in_eukaryotes
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5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00400.31 | WD40 | 210 | 248 | PF04003.11 | Utp12 | 506 | 601 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | Ribosome biogenesis in eukaryotes | U3 small nucleolar RNA-associated protein 5 | ko03008 | K14546 |
10.Gene Ontology GO Accession | GO Annotation | GO:0005515 | protein binding |
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