Gene details

Annotation of co-expression genes

PH01001604G0210's details annotation

1.Annotation

ICBR annotation: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed

Blast result AT3G06350 : 6.00E-121
Blast annotation: dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative

2.Location

Scaffold: PH01001604
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000740	Phenylalanine,_tyrosine_and_tryptophan_biosynthesis CAMK_CAMKL-CHK1 (from iTAK) shikimate 3-dehydrogenase (NADP+) activity, 3-dehydroquinate dehydratase activity, intracellular protein transport, membrane coat, clathrin adaptor complex, COPII vesicle coat,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
407 Phenylalanine, tyrosine and tryptophan biosynthesis	3-dehydroquinate dehydratase / shikimate dehydrogenase[EC:4.2.1.10;EC:1.1.1.25]		K13832

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0003855	3-dehydroquinate dehydratase activity
GO:0004764	shikimate 3-dehydrogenase (NADP+) activity
GO:0055114	oxidation-reduction process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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