|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis | 0.00150007 | KEGG | | CAMK_CAMKL-CHK1 (from iTAK) | 0.012435139 | GFam | | shikimate 3-dehydrogenase (NADP+) activity, | 0.01660647 | GO:0004764 | | 3-dehydroquinate dehydratase activity, | 0.01660647 | GO:0003855 | | intracellular protein transport, | 0.029021713 | GO:0006886 | | membrane coat, | 0.032235717 | GO:0030117 | | clathrin adaptor complex, | 0.032235717 | GO:0030131 | | COPII vesicle coat, | 0.032235717 | GO:0030127 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000009G2840 | CBL-interacting protein kinase 2 | AT5G07070 (3.00E-135) | | PH01000066G0670 | Galactose-binding protein | AT1G71360 (6.00E-105) | | PH01001053G0370 | EamA-like transporter family | AT4G32140 (2.00E-118) | | PH01001401G0190 | Adaptin family protein | AT4G11380 (0.00E+00) | | PH01001540G0430 | poltergeist like 1 | AT2G35350 (1.20E-71) | | PH01001604G0210 | dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative | AT3G06350 (6.00E-121) | | PH01001879G0310 | Sec23/Sec24 protein transport family protein | AT3G23660 (0.00E+00) | | PH01002397G0060 | Endomembrane protein 70 protein family | AT2G24170 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000772 | CAMK_CAMKL-CHK1 (from iTAK)
integral to membrane,
| details | | CFinderM000805 | Sulfur_metabolism
cysteine biosynthetic process from serine,
peptide-methionine-(S)-S-oxide reductase activity,
cysteine synthase activity,
Cysteine_and_methionine_metabolism
cellulose biosynthetic process,
chaperone binding,
cellulose synthase (UDP-forming) activity,
| details | | CFinderM001652 | mRNA_cleavage_factor_complex
GT31 GlycosylTransferases
mRNA_polyadenylation
mRNA_binding
mRNA_surveillance_pathway
protein glycosylation,
cellulose biosynthetic process,
membrane,
| details |
4.Expression profilings |
