PH01001634G0310's details annotation
1.Annotation
ICBR annotation: ankyrin repeat domain containing protein, putative, expressed
Blast result AT4G35450 : 4.30E-46
Blast annotation: ankyrin repeat-containing protein 2
2.Location
Scaffold: PH01001634
Strand: +
| Region | Start | End |
| gene | 238988 | 244319 |
| mRNA | 238988 | 244319 |
| exon | 238988 | 239667 |
| exon | 240686 | 240804 |
| exon | 241033 | 241242 |
| exon | 241356 | 241504 |
| exon | 241580 | 241751 |
| exon | 242357 | 242449 |
| exon | 243361 | 243500 |
| exon | 243582 | 244319 |
| CDS | 239658 | 239667 |
| CDS | 240686 | 240804 |
| CDS | 241033 | 241242 |
| CDS | 241356 | 241504 |
| CDS | 241580 | 241751 |
| CDS | 242357 | 242449 |
| CDS | 243361 | 243500 |
| CDS | 243582 | 243681 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.