Gene details

Annotation of co-expression genes

PH01001650G0140's details annotation

1.Annotation

ICBR annotation: expressed_protein

Blast result AT5G65650 : 5.20E-27
Blast annotation: Protein of unknown function (DUF1195)

2.Location

Scaffold: PH01001650
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001317	Ether_lipid_metabolism Endocytosis Glycerophospholipid_metabolism
coexpression network	CFinderM001525	MYB-related Transcription_Regulator(from iTAK)
coexpression network	CFinderM001586	mediator complex, regulation of transcription from RNA polymerase II promoter, transcription, DNA-dependent, ribonucleoside_binding RNA_polymerase_II_transcription_cofactor_activity RNA_polymerase
coexpression network	CFinderM001820	mediator complex, CBM43 Carbohydrate-Binding_Modules GH17 Glycoside_Hydrolases
coexpression network	CFinderM001849	SNF2 Transcription_Regulator(from iTAK) mediator complex, regulation of transcription from RNA polymerase II promoter,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
null	null

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.