Gene details

Annotation of co-expression genes

PH01001681G0160's details annotation

1.Annotation

ICBR annotation: ras-related protein, putative, expressed

Blast result AT4G19640 : 7.40E-86
Blast annotation: Ras-related small GTP-binding family protein

2.Location

Scaffold: PH01001681
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	details
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001722	GTP_catabolic_process small GTPase mediated signal transduction, protein transport, signal transduction, GTPase activity, GTP binding, large ribosomal subunit, intracellular, membrane, nucleocytoplasmic transport,
coexpression network	CFinderM001761	large ribosomal subunit, intracellular,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00071.21	Ras	13	173

9.KEGG Pathway

10.Gene Ontology

GO Accession	GO Annotation
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0005622	intracellular
GO:0006184	GTP catabolic process
GO:0006886	intracellular protein transport
GO:0006913	nucleocytoplasmic transport
GO:0007165	signal transduction
GO:0007264	small GTPase mediated signal transduction
GO:0015031	protein transport
GO:0016020	membrane

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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