PH01001737G0160's details annotation
1.Annotation
ICBR annotation: prenylated rab acceptor, putative, expressed
Blast result AT3G56110 : 2.60E-54
Blast annotation: prenylated RAB acceptor 1.B1
2.Location
Scaffold: PH01001737
Strand: -
| Region | Start | End |
| gene | 99412 | 100483 |
| mRNA | 99412 | 100483 |
| exon | 99412 | 100483 |
| CDS | 99782 | 100447 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000766 | MYB Transcription_Regulator(from PlantTFDB) |
| coexpression network | CFinderM001609 | RNA_transport mRNA_surveillance_pathway |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03208.18 | PRA1 | 57 | 197 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.