PH01001785G0100's details annotation 1.Annotation ICBR annotation: ribosomal protein, putative, expressed
Blast result AT3G52580 : 1.80E-60 Blast annotation: Ribosomal protein S11 family protein 2.Location Scaffold: PH01001785 Strand: - Region | Start | End | gene | 51631 | 55262 | mRNA | 51631 | 55262 | exon | 51631 | 53422 | exon | 53533 | 53662 | exon | 53845 | 53930 | exon | 54017 | 54062 | exon | 54141 | 54260 | exon | 55177 | 55262 | CDS | 53355 | 53422 | CDS | 53533 | 53662 | CDS | 53845 | 53930 | CDS | 54017 | 54062 | CDS | 54141 | 54260 | CDS | 55177 | 55179 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM001233 | Ribosome translation, structural constituent of ribosome, intracellular, Ribosome mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), ATP synthesis coupled proton transport, small ribosomal subunit, rRNA binding, hydrogen ion transmembrane transporter activity, Oxidative_phosphorylation
|
5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF00411.18 | Ribosomal_S11 | 28 | 146 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | Ribosome | small subunit ribosomal protein S14e | ko03011 | K02955 |
10.Gene Ontology GO Accession | GO Annotation | GO:0003735 | structural constituent of ribosome | GO:0005622 | intracellular | GO:0005840 | ribosome | GO:0006412 | translation |
|