PH01001990G0120's details annotation
1.Annotation
ICBR annotation: MYB family transcription factor, putative, expressed
Blast result AT2G03470 : 3.00E-51
Blast annotation: ELM2 domain-containing protein
2.Location
Scaffold: PH01001990
Strand: +
| Region | Start | End |
| gene | 70375 | 74501 |
| mRNA | 70375 | 74501 |
| exon | 70375 | 71622 |
| exon | 71693 | 71908 |
| exon | 72066 | 74501 |
| CDS | 71481 | 71622 |
| CDS | 71693 | 71908 |
| CDS | 72066 | 73267 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001664 | MYB_related Transcription_Regulator(from PlantTFDB) GRAS Transcription_Regulator(from PlantTFDB) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from PlantTFDB) | MYB_related |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.