CFinderM001664's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
MYB_related Transcription_Regulator(from PlantTFDB)0.029033967GFam
GRAS Transcription_Regulator(from PlantTFDB)0.029033967GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000160G0460Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domainAT5G49680 (0.00E+00)
PH01000162G0760methyl-CPG-binding domain 11AT3G15790 (2.40E-32)
PH01000896G0440SCARECROW-like 8AT5G52510 (2.40E-65)
PH01001166G0460transducin family protein / WD-40 repeat family proteinAT2G46560 (0.00E+00)
PH01001678G0320-AT5G58020 (4.80E-88)
PH01001990G0120ELM2 domain-containing proteinAT2G03470 (3.00E-51)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000260Glycine,_serine_and_threonine_metabolism
nucleus,
Glyoxylate_and_dicarboxylate_metabolism
RNA_degradation
cofactor binding,
details
CFinderM000481proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
SNF2 Transcription_Regulator(from iTAK)
Phagosome
Oxidative_phosphorylation
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
RB Transcription_Regulator(from iTAK)
DDT Transcription_Regulator(from iTAK)
clathrin coat of trans-Golgi network vesicle,
clathrin coat of coated pit,
mediator complex,
PHD Transcription_Regulator(from iTAK)
details
CFinderM000617SNF2 Transcription_Regulator(from iTAK)
helicase activity,
DNA binding,
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,
details
CFinderM000624proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM000862DBP Transcription_Regulator(from iTAK)
Golgi stack,
GPI-anchor transamidase complex,
details
CFinderM000878Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
Phagosome
details
CFinderM001077SNARE_interactions_in_vesicular_transport
details
CFinderM001091DBP Transcription_Regulator(from iTAK)
protein dephosphorylation,
nucleosome assembly,
details
CFinderM001335clathrin coat of trans-Golgi network vesicle,
clathrin coat of coated pit,
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
WRKY Transcription_Regulator(from PlantTFDB)
Phagosome
details
CFinderM001489Steroid_hormone_biosynthesis
Fatty_acid_elongation
Biosynthesis_of_unsaturated_fatty_acids
RNA_degradation
details
CFinderM001676Spliceosome
details
CFinderM001691Spliceosome
Rab GTPase activator activity,
details
CFinderM001796HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001876Spliceosome
details
CFinderM001893Golgi-associated vesicle,
Terpenoid_backbone_biosynthesis
membrane coat,
COPI vesicle coat,
isoprenoid biosynthetic process,
details

4.Expression profilings