|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | SNF2 Transcription_Regulator(from iTAK) | 3.58E-05 | GFam | | helicase activity, | 0.007273044 | GO:0004386 | | DNA binding, | 0.01362424 | GO:0003677 | | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, | 0.047501748 | GO:0016818 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000019G1620 | transcription regulatory protein SNF2, putative | AT2G46020 (0.00E+00) | | PH01000160G0460 | Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain | AT5G49680 (0.00E+00) | | PH01000391G0300 | Helicase/SANT-associated, DNA binding protein | AT3G24880 (0.00E+00) | | PH01000862G0160 | ATP-dependent helicase family protein | AT1G08060 (7.90E-93) | | PH01002777G0070 | Protein of unknown function, DUF584 | AT3G15040 (2.30E-14) | | PH01258086G0010 | - | - (-) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000481 | proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
SNF2 Transcription_Regulator(from iTAK)
Phagosome
Oxidative_phosphorylation
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
RB Transcription_Regulator(from iTAK)
DDT Transcription_Regulator(from iTAK)
clathrin coat of trans-Golgi network vesicle,
clathrin coat of coated pit,
mediator complex,
PHD Transcription_Regulator(from iTAK)
| details | | CFinderM000624 | proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
HB-other Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001077 | SNARE_interactions_in_vesicular_transport
| details | | CFinderM001140 | RB Transcription_Regulator(from iTAK)
nucleus,
regulation_of_cell_cycle
SNF2 Transcription_Regulator(from iTAK)
Drug_metabolism_-_cytochrome_P450
Metabolism_of_xenobiotics_by_cytochrome_P450
Glutathione_metabolism
| details | | CFinderM001334 | proton-transporting V-type ATPase, V0 domain,
mediator complex,
proton-transporting two-sector ATPase complex, proton-transporting domain,
RNA metabolic process,
regulation of transcription from RNA polymerase II promoter,
ATP hydrolysis coupled proton transport,
| details | | CFinderM001337 | GT41 GlycosylTransferases
DDT Transcription_Regulator(from iTAK)
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
RNA metabolic process,
| details | | CFinderM001410 | PHD Transcription_Regulator(from iTAK)
mediator complex,
proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
SNF2 Transcription_Regulator(from iTAK)
regulation of transcription from RNA polymerase II promoter,
ATP hydrolysis coupled proton transport,
RNA metabolic process,
zinc ion binding,
protein binding,
RNA_polymerase_II_transcription_cofactor_activity
N-acetyltransferase_activity
hydrogen ion transmembrane transporter activity,
DNA binding,
| details | | CFinderM001411 | proton-transporting V-type ATPase, V0 domain,
proton-transporting two-sector ATPase complex, proton-transporting domain,
RNA metabolic process,
ATP hydrolysis coupled proton transport,
| details | | CFinderM001664 | MYB_related Transcription_Regulator(from PlantTFDB)
GRAS Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001676 | Spliceosome
| details | | CFinderM001796 | HB-other Transcription_Regulator(from PlantTFDB)
| details | | CFinderM001876 | Spliceosome
| details |
4.Expression profilings |
