Gene details

Annotation of co-expression genes

PH01002143G0030's details annotation

1.Annotation

ICBR annotation: calmodulin-binding transcription activator 5, putative, expressed

Blast result AT4G16150 : 0.00E+00
Blast annotation: calmodulin binding;transcription regulators

2.Location

Scaffold: PH01002143
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000977	mRNA_surveillance_pathway CAMTA Transcription_Regulator(from PlantTFDB) Ubiquitin_mediated_proteolysis defense response,
coexpression network	CFinderM001436	STE_STE20-Fray (from iTAK) CAMTA Transcription_Regulator(from PlantTFDB) Ubiquitin_mediated_proteolysis
coexpression network	CFinderM001457	mRNA_surveillance_pathway Diterpenoid_biosynthesis CAMTA Transcription_Regulator(from PlantTFDB) protein binding, mechanically-gated_ion_channel_activity
coexpression network	CFinderM001729	mRNA_surveillance_pathway CAMTA Transcription_Regulator(from PlantTFDB) protein binding, transferase activity, transferring acyl groups,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
Transcription_Regulator(from iTAK)	CAMTA
Transcription_Regulator(from PlantTFDB)	CAMTA

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.