PH01002238G0110's details annotation 1.Annotation ICBR annotation: OsWRKY48 - Superfamily of TFs having WRKY and zinc finger domains, expressed
Blast result - : - Blast annotation: - 2.Location Scaffold: PH01002238 Strand: + Region | Start | End | gene | 72618 | 74469 | mRNA | 72618 | 74469 | exon | 72618 | 73267 | exon | 73351 | 74469 | CDS | 72741 | 73267 | CDS | 73351 | 73849 |
UCSC genome browser 3.Network  4.Functional module Method | Module ID | Function Annotation | coexpression network | CFinderM000058 | cysteamine dioxygenase activity, LBD Transcription_Regulator(from PlantTFDB) oxidation-reduction process, Taurine_and_hypotaurine_metabolism
| coexpression network | CFinderM000738 | metal ion transport, metal ion binding, WRKY Transcription_Regulator(from PlantTFDB)
|
5.Cis-elements Details in 3kb promoter region 6.Expression profilings
7.Gene family Category | Family | Transcription_Regulator(from iTAK) | WRKY | Transcription_Regulator(from PlantTFDB) | WRKY |
8.Protein domain Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start | PF03106.14 | WRKY | 156 | 215 |
9.KEGG Pathway Pathway | KEGG Ortholog | Pathway ID | KO | null | null | null | null |
10.Gene Ontology GO Accession | GO Annotation | GO:0003700 | sequence-specific DNA binding transcription factor activity | GO:0006355 | regulation of transcription, DNA-dependent | GO:0043565 | sequence-specific DNA binding |
|