PH01002749G0220's details annotation
1.Annotation
ICBR annotation: protein kinase, putative, expressed
Blast result AT3G13690 : 0.00E+00
Blast annotation: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
2.Location
Scaffold: PH01002749
Strand: +
| Region | Start | End |
| gene | 127338 | 134865 |
| mRNA | 127338 | 134865 |
| exon | 127338 | 129926 |
| exon | 130320 | 130459 |
| exon | 130552 | 130646 |
| exon | 130741 | 131765 |
| exon | 131990 | 132153 |
| exon | 132492 | 132568 |
| exon | 133151 | 133298 |
| exon | 133591 | 133668 |
| exon | 133838 | 134865 |
| CDS | 129809 | 129926 |
| CDS | 130320 | 130459 |
| CDS | 130552 | 130646 |
| CDS | 130741 | 131765 |
| CDS | 131990 | 132153 |
| CDS | 132492 | 132568 |
| CDS | 133151 | 133298 |
| CDS | 133591 | 133668 |
| CDS | 133838 | 134068 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001010 | RLK-Pelle_PERK-2 (from iTAK) ethylene mediated signaling pathway, endoplasmic reticulum membrane, Plant_hormone_signal_transduction protein histidine kinase activity, Others Transcription_Regulator(from iTAK) two-component sensor activity, protein tyrosine kinase activity, two-component signal transduction system (phosphorelay), EIL Transcription_Regulator(from PlantTFDB) two-component response regulator activity, signal transducer activity, sulfate assimilation, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07714.16 | Pkinase_Tyr | 377 | 573 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004713 | protein tyrosine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.