PH01002923G0190's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G47010 : 0.00E+00
Blast annotation: -
2.Location
Scaffold: PH01002923
Strand: +
| Region | Start | End |
| gene | 119005 | 122659 |
| mRNA | 119005 | 122659 |
| exon | 119005 | 119594 |
| exon | 119746 | 120371 |
| exon | 120692 | 121291 |
| exon | 121393 | 122659 |
| CDS | 119360 | 119594 |
| CDS | 119746 | 120371 |
| CDS | 120692 | 121291 |
| CDS | 121393 | 121563 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000195 | pyridoxine biosynthetic process, S-adenosylmethionine_biosynthetic_process proteolysis, pyridoxamine-phosphate oxidase activity, oxidoreductase activity, acting on the CH-NH2 group of donors, methionine adenosyltransferase activity, Endocytosis aminopeptidase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.