PH01002946G0060's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G31430 : 3.50E-15
Blast annotation: -
2.Location
Scaffold: PH01002946
Strand: -
| Region | Start | End |
| gene | 57198 | 62305 |
| mRNA | 57198 | 62305 |
| exon | 57198 | 57461 |
| exon | 57594 | 57798 |
| exon | 58506 | 58679 |
| exon | 58806 | 59163 |
| exon | 60307 | 60406 |
| exon | 61317 | 62305 |
| CDS | 57325 | 57461 |
| CDS | 57594 | 57798 |
| CDS | 58506 | 58679 |
| CDS | 58806 | 59163 |
| CDS | 60307 | 60406 |
| CDS | 61317 | 61611 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000256 | signal recognition particle, proton-transporting two-sector ATPase complex, proton-transporting domain, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.