PH01003837G0070's details annotation
1.Annotation
ICBR annotation: plant viral response family protein, putative, expressed
Blast result AT2G37800 : 2.80E-23
Blast annotation: Cysteine/Histidine-rich C1 domain family protein
2.Location
Scaffold: PH01003837
Strand: +
| Region | Start | End |
| gene | 75337 | 76465 |
| mRNA | 75337 | 76465 |
| exon | 75337 | 76465 |
| CDS | 75567 | 76298 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000578 | extracellular matrix, NF-YC Transcription_Regulator(from PlantTFDB) protein-disulfide_reductase_activity intracellular_signal_transduction metallopeptidase activity, NAC Transcription_Regulator(from PlantTFDB) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03107.15 | C1_2 | 21 | 67 |
| PF03107.15 | C1_2 | 172 | 199 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0035556 | intracellular signal transduction |
| GO:0047134 | protein-disulfide reductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.