1.Module annotation (GSEA enrichment result) Function Annotation | FDR | Gene Ontolog | extracellular matrix, | 0.001687605 | GO:0031012 | NF-YC Transcription_Regulator(from PlantTFDB) | 0.010148951 | GFam | protein-disulfide_reductase_activity | 0.023815918 | GO:0047134 | intracellular_signal_transduction | 0.037440852 | GO:0035556 | metallopeptidase activity, | 0.039077263 | GO:0008237 | NAC Transcription_Regulator(from PlantTFDB) | 0.04875112 | GFam |
2.Module member annotation Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | PH01000311G1130 | Protein of unknown function (DUF1644) | AT1G68140 (2.90E-62) | PH01000706G0760 | matrix metalloproteinase | AT1G70170 (5.70E-90) | PH01001184G0040 | Arabidopsis NAC domain containing protein 87 | AT5G18270 (4.40E-75) | PH01001263G0090 | VQ motif-containing protein | AT4G39720 (1.40E-09) | PH01001724G0410 | nuclear factor Y, subunit C11 | AT3G12480 (4.50E-41) | PH01003837G0070 | Cysteine/Histidine-rich C1 domain family protein | AT2G37800 (2.80E-23) |
3.Direct connection functional modules Module ID | Function Annotation | Overlap condition | CFinderM000404 | Valine,_leucine_and_isoleucine_degradation Benzoate_degradation RWP-RK Transcription_Regulator(from iTAK) Nin-like Transcription_Regulator(from PlantTFDB) Biosynthesis_of_unsaturated_fatty_acids alpha-Linolenic_acid_metabolism Fatty_acid_metabolism Peroxisome G2-like Transcription_Regulator(from PlantTFDB) GARP-G2-like Transcription_Regulator(from iTAK)
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4.Expression profilings |