Gene details

Annotation of co-expression genes

PH01003937G0060's details annotation

1.Annotation

ICBR annotation: glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed

Blast result AT1G27680 : 4.00E-163
Blast annotation: ADPGLC-PPase large subunit

2.Location

Scaffold: PH01003937
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001187	glycogen biosynthetic process, 'de novo' IMP biosynthetic process, 5-(carboxyamino)imidazole_ribonucleotide_mutase_activity

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00483.22	NTP_transferase	89	369

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Starch and sucrose metabolism	glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]	ko00500	K00975
Amino sugar and nucleotide sugar metabolism	glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]	ko00520	K00975

10.Gene Ontology

GO Accession	GO Annotation
GO:0005978	glycogen biosynthetic process
GO:0009058	biosynthetic process
GO:0016740	transferase activity
GO:0016779	nucleotidyltransferase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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