CFinderM001187's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
glycogen biosynthetic process,0.02804421GO:0005978
'de novo' IMP biosynthetic process,0.02804421GO:0006189
5-(carboxyamino)imidazole_ribonucleotide_mutase_activity0.031416079GO:0034023

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000020G2200Ribosome recycling factorAT3G01800 (1.10E-14)
PH01000197G0160AAA-type ATPase family proteinAT2G18330 (0.00E+00)
PH01000209G0080actin-related protein 6AT3G33520 (1.00E-129)
PH01000238G0910thioredoxin family proteinAT2G47470 (2.00E-150)
PH01000240G1000-- (-)
PH01000840G0660nucleosome assembly protein 1;2AT2G19480 (2.10E-62)
PH01002711G0240pumilio 3AT2G29140 (0)
PH01003107G0170phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putativeAT2G37690 (1.00E-134)
PH01003937G0060ADPGLC-PPase large subunitAT1G27680 (4.00E-163)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000341exosome_(RNase_complex)
COP9_signalosome
details
CFinderM001014SET Transcription_Regulator(from iTAK)
endoplasmic reticulum,
nucleus,
ubiquitin ligase complex,
histone_methylation
details
CFinderM001195nucleic acid binding,
ARF Transcription_Regulator(from PlantTFDB)
B3-ARF Transcription_Regulator(from iTAK)
C3H Transcription_Regulator(from PlantTFDB)
endoplasmic reticulum,
response to hormone stimulus,
glycerol ether metabolic process,
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001362Protein_processing_in_endoplasmic_reticulum
mannose biosynthetic process,
Lysine_degradation
SET Transcription_Regulator(from iTAK)
histone_methylation
phosphomannomutase activity,
histone_lysine_methylation
details
CFinderM001452'de novo' IMP biosynthetic process,
5-(carboxyamino)imidazole_ribonucleotide_mutase_activity
details
CFinderM001556RNA_transport
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001583endoplasmic reticulum,
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001584details

4.Expression profilings


Show details about module gene expression profiling