PH01005983G0010's details annotation
1.Annotation
ICBR annotation: heat shock protein DnaJ, putative, expressed
Blast result AT2G01710 : 7.80E-31
Blast annotation: Chaperone DnaJ-domain superfamily protein
2.Location
Scaffold: PH01005983
Strand: +
| Region | Start | End |
| gene | 1629 | 4996 |
| mRNA | 1629 | 4996 |
| exon | 1629 | 2945 |
| exon | 3201 | 4996 |
| CDS | 2160 | 2945 |
| CDS | 3201 | 4448 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001228 | cullin-RING ubiquitin ligase complex, SNF2 Transcription_Regulator(from iTAK) Nucleotide_excision_repair cell redox homeostasis, Ubiquitin_mediated_proteolysis ubiquitin-dependent protein catabolic process, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.