CFinderM000100's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RLK-Pelle_RLCK-IXb (from iTAK)0.005892239GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000005G2590-AT4G27610 (5.50E-54)
PH01000362G0920-- (-)
PH01000463G0650-- (-)
PH01000940G0040alpha/beta-Hydrolases superfamily proteinAT1G05800 (4.10E-96)
PH01002686G0130-- (-)
PH01005142G0050F-box family proteinAT2G36090 (9.40E-32)
PH01006991G0010-AT3G61410 (1.40E-25)
PH01009338G0010U-box domain-containing protein kinase family proteinAT2G45910 (4.00E-115)
PH01028992G0010-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000319nucleoside_diphosphate_phosphorylation
carbohydrate phosphorylation,
histone_H4_acetylation
UTP biosynthetic process,
CTP biosynthetic process,
histone_H2A_acetylation
GTP biosynthetic process,
aromatic amino acid family metabolic process,
chromatin remodeling,
details
CFinderM000429metal ion transport,
RLK-Pelle_RLCK-IXb (from iTAK)
GRAS Transcription_Regulator(from PlantTFDB)
RLK-Pelle_L-LEC (from iTAK)
details
CFinderM000684Glycosaminoglycan_biosynthesis_-_heparan_sulfate_/_heparin
Glycosaminoglycan_biosynthesis_-_chondroitin_sulfate_/_dermatan_sulfate
ERF Transcription_Regulator(from PlantTFDB)
AP2/ERF-ERF Transcription_Regulator(from iTAK)
mRNA_surveillance_pathway
protein glycosylation,
details

4.Expression profilings


Show details about module gene expression profiling