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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | signal recognition particle, | 0.006745676 | GO:0048500 | | SRP-dependent cotranslational protein targeting to membrane, | 0.00981978 | GO:0006614 | | RNA metabolic process, | 0.00981978 | GO:0016070 | | Protein_export | 0.028581892 | KEGG | | 7S RNA binding, | 0.035805498 | GO:0008312 | | RNA_transport | 0.044179879 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000071G1300 | SRP72 RNA-binding domain | AT1G67680 (0.00E+00) | | PH01000087G1640 | vitamin E pathway gene 5 | AT5G04490 (6.90E-48) | | PH01000118G1510 | MIF4G domain-containing protein / MA3 domain-containing protein | AT5G57870 (0.00E+00) | | PH01000165G1430 | Putative lysine decarboxylase family protein | AT5G11950 (2.60E-75) | | PH01001480G0200 | - | AT4G22830 (7.40E-33) | | PH01002114G0020 | Protein of unknown function (DUF1712) | AT1G80910 (1.00E-112) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000312 | proton-transporting V-type ATPase, V0 domain,
phosphatidylinositol phosphorylation,
ATP hydrolysis coupled proton transport,
transcription, DNA-dependent,
DNA-directed RNA polymerase activity,
hydrogen ion transmembrane transporter activity,
| details | | CFinderM000879 | Alanine,_aspartate_and_glutamate_metabolism
GNAT Transcription_Regulator(from iTAK)
protein retention in ER lumen,
nitrogen compound metabolic process,
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,
ER retention sequence binding,
N-acetyltransferase_activity
| details |
4.Expression profilings |
