CFinderM001386's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
PHD Transcription_Regulator(from iTAK)0.008224126GFam
COPII vesicle coat,0.008430118GO:0030127
Nitrogen_metabolism0.021317953KEGG
ER to Golgi vesicle-mediated transport,0.02368319GO:0006888
Oxidative_phosphorylation0.035928121KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000062G1960RING/FYVE/PHD zinc finger superfamily proteinAT3G20280 (1.10E-38)
PH01000068G1750histone acetyltransferase of the MYST family 1AT5G64610 (0.00E+00)
PH01000273G0700Mitochondrial substrate carrier family proteinAT5G19760 (2.00E-120)
PH01000907G0170Sec23/Sec24 protein transport family proteinAT4G01810 (0.00E+00)
PH01001492G0110-AT5G65490 (2.40E-80)
PH01001902G0140Cytochrome C1 familyAT3G27240 (9.00E-142)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000237solute:hydrogen antiporter activity,
details
CFinderM000434COPII vesicle coat,
HSF Transcription_Regulator(from PlantTFDB)
details
CFinderM000863MADS-M-type Transcription_Regulator(from iTAK)
M-type_MADS Transcription_Regulator(from PlantTFDB)
COPII vesicle coat,
ATP:ADP antiporter activity,
ER to Golgi vesicle-mediated transport,
endoplasmic reticulum,
details
CFinderM000883sterol metabolic process,
nuclear chromosome,
cholestenol delta-isomerase activity,
Nitrogen_metabolism
Steroid_biosynthesis
details
CFinderM001190M-type_MADS Transcription_Regulator(from PlantTFDB)
MADS-M-type Transcription_Regulator(from iTAK)
HSF Transcription_Regulator(from PlantTFDB)
COPII vesicle coat,
ER to Golgi vesicle-mediated transport,
endoplasmic reticulum,
details
CFinderM001460nucleus,
CAMTA Transcription_Regulator(from PlantTFDB)
Nitrogen_metabolism
Oxidative_phosphorylation
bZIP Transcription_Regulator(from PlantTFDB)
details
CFinderM001520SWI/SNF-SWI3 Transcription_Regulator(from iTAK)
Glycine,_serine_and_threonine_metabolism
L-serine biosynthetic process,
RNA metabolic process,
Methane_metabolism
phosphoglycerate dehydrogenase activity,
glycopeptide_alpha-N-acetylgalactosaminidase_activity
details
CFinderM001564Oxidative_phosphorylation
glycopeptide_alpha-N-acetylgalactosaminidase_activity
inorganic diphosphatase activity,
phosphate-containing compound metabolic process,
details
CFinderM001806PHD Transcription_Regulator(from iTAK)
Nitrogen_metabolism
Oxidative_phosphorylation
details

4.Expression profilings