Tissue	Sample Name	Sample information	Source	Reference
Leaf	Leaf_21d_IG47182	cultiver IG47182 21-d-old seedlings	DRX001394	PMID:23125207
Leaf	Leaf_21d_PI476874	cultiver PI476874 21-d-old seedlings	DRX001395	PMID:23125207
Spike	Spike_before_heading_IG47182	cultiver IG47182 before heading stage	DRX011554	PMID:24158251
Spike	Spike_before_heading_PI476874	cultiver PI476874 before heading stage	DRX011555	PMID:24158251
Root	Root_14dd_AL8/78	cultiver AL8/78 14days	ERX2246646, ERX2246647	PRJEB23317
Leaf	Leaf_14dd_AL8/78	cultiver AL8/78 14days	ERX2246648, ERX2246649, ERX2246650	PRJEB23317
Seedling	Seedling_4dd_AL8/78	cultiver AL8/78 4dd	ERX2246652, ERX2246653	PRJEB23317
Grain	Grain_mixdd_AL8/78	cultiver AL8/78 5dd+10dd+15dd+20dd+27dd+30dd	ERX2246654	PRJEB23317
Grain	Grain_10dd_AL8/78	cultiver AL8/78 10dd	ERX2246655, ERX2246657	PRJEB23317
Grain	Grain_27dd_AL8/78	cultiver AL8/78 27dd	ERX2246658, ERX2246659, ERX2246660	PRJEB23317
Leaf	Leaf_21d	21 day after sowing	ERX386524	PMID:27423334
Endosperm	Endosperm_mixDAP_Y177	cultiver Y177 MIX of 15, 20DAP	SRX1791722, SRX2635032	PRJNA322418
Endosperm	Endosperm_mixDAP_RM220	cultiver RM220 MIX of 15, 20DAP	SRX1791723	PRJNA322418
Leaf	Leaf_30d_TQ27	cultiver TQ27 30 days	SRX2413711, SRX2413716	PRJNA353049
Root	Root_3leaf_TQ27	cultiver TQ27 3 leaf stage	SRX2748116, SRX2748124, SRX2748125	PMID:29265531
Endosperm	Endosperm_3leaf_TQ27	cultiver TQ27 6 days after pollination	SRX2748181,SRX2748253	PMID:29265531
Shoot	Shoot_5leaf	accession 2220007 fifth leaf appeared	SRX330095	PMID:24726045
Root	Root_5leaf	accession 2220007 fifth leaf appeared	SRX330097	PMID:24726045
Seedling	Seedling_7d_AS2404	cultiver AS2404 7-d-old	SRX512877, SRX512878	PMID:24838975
Seed	Seed_7d_AS2404	cultiver AS2404 11 DAF(days after flowering)	SRX512881,SRX512882	PMID:24838975