TreatCFM001767's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| farnesol dehydrogenase activity | 0.002275481 | GO:0047886 |
| vacuolar membrane | 0.004167687 | GO:0005774 |
| farnesol metabolic process | 0.007084392 | GO:0016487 |
| ADP binding | 0.009090633 | GO:0043531 |
| Terpenoid backbone biosynthesis | 0.010709246 | KEGG pathway |
| regulation of signal transduction | 0.011009423 | GO:0009966 |
| negative regulation of abscisic acid-activated signaling pathway | 0.011009423 | GO:0009788 |
| protein processing | 0.014142428 | GO:0016485 |
| coenzyme binding | 0.01474219 | GO:0050662 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001270 | AT3G46530 (1.00E-04) | RPP13|RECOGNITION OF PERONOSPORA PARASITICA 13 |
| CRO_T006210 | AT1G50180 (6.00E-11) | NB-ARC domain-containing disease resistance protein |
| CRO_T019769 | AT1G09480 (5.00E-17) | NAD(P)-binding Rossmann-fold superfamily protein |
| CRO_T021779 | AT4G15840 (1.00E-97) | BTB/POZ domain-containing protein |
| CRO_T023888 | AT5G53330 (3.00E-26) | Ubiquitin-associated/translation elongation factor EF1B protein |
| CRO_T029227 | AT3G20730 (1.00E-58) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T032705 | AT3G44330 (6.00E-42) | INVOLVED IN: protein processing |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001595 | regulation of signal transduction protein processing RNA transport | details |
| TreatCFM001741 | Apelin signaling pathway long-distance posttranscriptional gene silencing production of siRNA involved in chromatin silencing by small RNA peptide catabolic process cell-cell signaling production of siRNA involved in RNA interference transcription, RNA-templated nucleic acid binding peptide binding RNA-directed RNA polymerase activity metalloaminopeptidase activity N-1-naphthylphthalamic acid binding acyl-CoA hydrolysis autophagy defense response to fungus cutin biosynthesis sporopollenin precursors biosynthesis suberin monomers biosynthesis | details |
| TreatCFM001766 | pyridoxamine-phosphate oxidase activity anisotropic cell growth pyridoxal phosphate biosynthetic process retrograde transport, vesicle recycling within Golgi alkaloid metabolic process Golgi organization Golgi transport complex cellulose biosynthetic process FMN binding ligase activity oxidation-reduction process | details |
| TreatCFM002070 | vacuolar membrane integral component of membrane Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) Transcription_related, Transcription regulator: mTERF potassium ion transmembrane transporter activity inorganic diphosphatase activity hydrogen-translocating pyrophosphatase activity exocyst localization cell tip growth regulation of signal transduction SNARE binding protein processing response to salt stress exocytosis potassium ion transmembrane transport proton transport | details |
| TreatCFM002159 | vacuolar membrane cell tip growth regulation of signal transduction potassium ion transmembrane transporter activity potassium ion transmembrane transport protein processing response to salt stress | details |
Expression profiles
 Show details about module gene expression profiling |