Solyc02g090770.1's detail annotation
Phytozome annotation
| Integrase-type DNA-binding superfamily protein |
Network
Functional module
| Module ID | Function Annotation | Category |
|---|
| CFinderADM000175 | Transcription factor: ERF
sequence-specific DNA binding transcription factor activity
regulation of transcription, DNA-dependent
methionine salvage cycle II (plants)
ethylene biosynthesis I (plants)
MAPK_signaling_pathway_-_plant
| global network |
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|
| Solyc02g090770.1 | SL2.40 | phytozomev10 | SL2.40ch02 | 46858589 | 46859200 | - |
Gene structure and chromatin state
Sequences
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|
| Nicotiana benthamiana(v0.44) | NbS00005599g0001.1 | 1.00E-61 | Ethylene responsive transcription factor 2b (AHRD V1 *-*- C0J9I6_9ROSA) |
| Solanum tuberosum | PGSC0003DMP400008014 | 3.00E-63 | Paramyosin |
| Capsicum annuum | Capang02g002805 | 3E-31 | |
| Capsicum annuum | Capang06g002412 | 1E-27 | |
| Capsicum annuum | CA02g11070 | 3.00E-55 | PREDICTED: ethylene-responsive transcription factor RAP2-3-like [Solanum lycopersicum] |
| Capsicum annuum | CA02g11050 | 3.00E-50 | AP2 domain class transcription factor |
| Solanum pennellii | Sopen02g035400.1 | 1.00E-93 | AP2 domain |
| Solanum pennellii | Sopen02g035430.1 | 8.00E-54 | AP2 domain |
| Petunia axillaris | Peaxi162Scf00450g00513.1 | 6.00E-44 | Ethylene-responsive transcription factor 11 |
| Solanum melongena | Sme2.5_00010.1_g00008.1 | 2.00E-72 | |
Gene family
KEGG pathway
| KO |
Enzyme |
Enzyme ID |
pathway |
mapID |
| - | - | - | - | - |
PlantCyC
| Enzyme ID |
Description |
Pathway |
Pathway id |
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|
| GO:0003700 | transcription factor activity, sequence-specific DNA binding | molecular_function |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
Pfam Domain
| Pfam accession | Pfam name | Alignment start | Alignment end |
|---|
| PF00847.16 | AP2 | 89 | 137 |
Expression pattern