Solyc07g064800.2's detail annotation

Phytozome annotation

Dihydrolipoamide succinyltransferase

Network

Network CategoryGlobal NetworkTissue Preferential NetworkStress differential network
Coexpression PositiveTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelistTop300 PCC genelist
PPI relationshipSolyc02g093110.2  Solyc03g013030.2  Solyc03g044260.2  Solyc03g112720.2  Solyc04g078620.2  Solyc07g021660.1  Solyc07g049360.2  Solyc12g088680.1  
miRNA-target relationshipnull

Functional module

Module IDFunction AnnotationCategory
CFinderADM000765metabolic process
transferase activity, transferring acyl groups
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
2-oxoglutarate decarboxylation to succinyl-CoA
pyruvate decarboxylation to acetyl CoA
Lysine_degradation
Central_carbon_metabolism_in_cancer
formation of glycosidic bonds, GlycosylTransferases: GTnc
global network

Location information

GeneAssemblySourcesChrStartEndStrand
Solyc07g064800.2SL2.40phytozomev10SL2.40ch076400980064015982+

Gene structure and chromatin state

more details in UCSCdetails of chromatin state

Sequences

Gene:
Transcript:
CDS:
Protein:

Top hits annotation

SpeciesTop HitsE-valueAnnotation
Nicotiana tabacumgene_626074.00E-158Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_324840Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_626081.00E-79Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_309109.00E-91Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_588904.00E-158Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_650000Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_309081.00E-157Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_593750Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_323741.00E-157Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_613250Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_323779.00E-91Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana tabacumgene_673690Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana benthamiana(v0.44)NbS00012322g0004.10Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (AHRD V1 **** B6TRW8_MAIZE)
Nicotiana benthamiana(v0.44)NbS00014187g0002.10Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (AHRD V1 **** B6TRW8_MAIZE)
Solanum tuberosumPGSC0003DMP4000386552.00E-175Gene of unknown function
Capsicum annuumCapang07g0023012E-178
Capsicum annuumCapang02g0003391E-160
Capsicum annuumCapana07g0023041.00E-172
Capsicum annuumCapana00g0044295.00E-160
Capsicum annuumCA07g197101.00E-180Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, putative
Capsicum annuumCA03g103602.00E-152Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, putative
Nicotiana benthamiana(v1.01)Niben101Scf00311g03010.10Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana benthamiana(v1.01)Niben101Scf04477g03011.10Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Nicotiana benthamiana(v1.01)Niben101Scf00435g05017.13.00E-168Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Solanum pennelliiSopen07g032980.13.00E-1782-oxoacid dehydrogenases acyltransferase (catalytic domain)
Solanum pennelliiSopen12g001080.11.00E-1572-oxoacid dehydrogenases acyltransferase (catalytic domain)
Petunia axillarisPeaxi162Scf00235g00427.10Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Petunia axillarisPeaxi162Scf00660g00120.10Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Petunia inflataPeinf101Scf00567g06039.15.00E-161Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Petunia inflataPeinf101Scf00552g03011.12.00E-160Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
Solanum melongenaSme2.5_00098.1_g00017.10
Solanum melongenaSme2.5_02998.1_g00009.13.00E-15

Gene family

Gene familySubfamily
--

KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00658dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2 EC:2.3.1.61 Carbon metabolism sly01200
Citrate cycle (TCA cycle)sly00020
Lysine degradationsly00310

PlantCyC

Enzyme ID Description Pathway Pathway id
EC-2.3.1.61dihydrolipoyllysine-residue succinyltransferase2-oxoglutarate decarboxylation to succinyl-CoAPWY-5084

Gene Ontology

GO termDescriptionCategory
GO:0016746transferase activity, transferring acyl groupsmolecular_function
GO:0008152metabolic processbiological_process

Pfam Domain

Pfam accessionPfam nameAlignment startAlignment end
PF00364.18Biotin_lipoyl102171
PF00198.192-oxoacid_dh238466

Expression pattern

 1. Expression trend for Solyc07g064800.2 global RNA-seq network
 2. Expression trend for Solyc07g064800.2 tissue preferential conditional network
 3. Expression trend for Solyc07g064800.2 stress differential conditional network
 4. Expression trend for Solyc07g064800.2 in different samples during fruit ripening
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