Solyc10g081280.1's detail annotation
Phytozome annotation
Network
| Network Category | Global Network | Tissue Preferential Network | Stress differential network |
|---|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist | Top300 PCC genelist |
| PPI relationship | null | ||
| miRNA-target relationship | null | ||
Functional module
| Module ID | Function Annotation | Category |
|---|---|---|
| TissueCFM000240 | tRNA (guanine-N7-)-methyltransferase activity phosphoglycerate kinase activity tRNA modification glycolysis lyase activity sucrose biosynthesis I (from photosynthesis) glycolysis I (from glucose 6-phosphate) Calvin-Benson-Bassham cycle glycolysis IV (plant cytosol) gluconeogenesis I Glyoxylate and dicarboxylate metabolism Carbon fixation in photosynthetic organisms | Tissue preferential network |
Location information
| Gene | Assembly | Sources | Chr | Start | End | Strand |
|---|---|---|---|---|---|---|
| Solyc10g081280.1 | SL2.40 | phytozomev10 | SL2.40ch10 | 61721586 | 61725254 | + |
Gene structure and chromatin state
| more details in UCSC | details of chromatin state |
Sequences
| Gene: |
| >Solyc10g081280.1 |
| Transcript: |
| Solyc10g081280.1.1 |
| CDS: |
| Solyc10g081280.1.1 |
| Protein: |
| Solyc10g081280.1.1 |
Top hits annotation
| Species | Top Hits | E-value | Annotation |
|---|---|---|---|
| Nicotiana tabacum | gene_3225 | 1.00E-46 | 2-dehydro-3-deoxyphosphogluconate aldolase_4-hydroxy-2-oxoglutarate aldolase |
| Nicotiana tabacum | gene_36729 | 2.00E-78 | 2-dehydro-3-deoxyphosphogluconate aldolase_4-hydroxy-2-oxoglutarate aldolase |
| Nicotiana tabacum | gene_87077 | 6.00E-48 | 2-dehydro-3-deoxyphosphogluconate aldolase_4-hydroxy-2-oxoglutarate aldolase |
| Nicotiana tabacum | gene_35142 | 2.00E-128 | 2-dehydro-3-deoxyphosphogluconate aldolase_4-hydroxy-2-oxoglutarate aldolase |
| Nicotiana tabacum | gene_36296 | 2.00E-78 | 2-dehydro-3-deoxyphosphogluconate aldolase_4-hydroxy-2-oxoglutarate aldolase |
| Nicotiana tabacum | gene_2892 | 1.00E-61 | 2-dehydro-3-deoxyphosphogluconate aldolase_4-hydroxy-2-oxoglutarate aldolase |
| Nicotiana benthamiana(v0.44) | NbS00012862g0015.1 | 6.00E-104 | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (AHRD V1 ***- D3EJ12_GEOS4) |
| Nicotiana benthamiana(v0.44) | NbS00030711g0006.1 | 3.00E-67 | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (AHRD V1 ***- D3EJ12_GEOS4) |
| Capsicum annuum | Capana10g002113 | 2.00E-84 | |
| Nicotiana benthamiana(v1.01) | Niben101Scf10041g00024.1 | 2.00E-95 | 2-dehydro-3-deoxyphosphogluconate aldolase [Halorubrum sp. T3] |
| Nicotiana benthamiana(v1.01) | Niben101Scf04175g00018.1 | 4.00E-64 | KHG/KDPG aldolase |
| Solanum pennellii | Sopen10g031780.1 | 9.00E-115 | KDPG and KHG aldolase |
| Petunia axillaris | Peaxi162Scf00153g00057.1 | 1.00E-87 | KHG/KDPG aldolase [Morus notabilis] |
| Petunia inflata | Peinf101Scf00911g00007.1 | 8.00E-93 | KHG/KDPG aldolase [Morus notabilis] |
| Solanum melongena | Sme2.5_00234.1_g00002.1 | 1.00E-111 |
Gene family
| Gene family | Subfamily |
|---|---|
| - | - |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| - | - | - | - | - |
PlantCyC
| Enzyme ID | Description | Pathway | Pathway id |
|---|---|---|---|
| - | - | - | - |
Gene Ontology
| GO term | Description | Category |
|---|---|---|
| GO:0003824 | catalytic activity | molecular_function |
| GO:0008152 | metabolic process | biological_process |
Pfam Domain
| Pfam accession | Pfam name | Alignment start | Alignment end |
|---|---|---|---|
| PF01081.15 | Aldolase | 31 | 222 |