CFinderADM000208 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| ammonium_transmembrane_transport | 0.010233942 | GO:0072488 |
| cell proliferation | 0.010233942 | GO:0008283 |
| carbohydrate metabolic process | 0.010233942 | GO:0005975 |
| ammonium_transport | 0.010233942 | GO:0015696 |
| ammonium transmembrane transporter activity | 0.013921441 | GO:0008519 |
| growth factor activity | 0.013921441 | GO:0008083 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 0.013921441 | GO:0004553 |
| cellular glucan metabolic process | 0.025635085 | GO:0006073 |
| extracellular region | 0.030446153 | GO:0005576 |
| xyloglucan:xyloglucosyl transferase activity | 0.039564352 | GO:0016762 |
| coenzyme binding | 0.041596387 | GO:0050662 |
| UDP-D-xylose biosynthesis | 0.005056226 | plantCyc |
| Plant-pathogen_interaction | 0.024606927 | KEGG |
| Plant_hormone_signal_transduction | 0.024606927 | KEGG |
| adhesion to carbohydrates, Glycoside Hydrolases:CBM18;hydrolysis and/or rearrangement of glycosidic bonds, Carbohydrate-Binding Modules:GH19 | 0.01644764 | gene family |
| hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | 0.024606927 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g005120.2 | xyloglucan endotransglucosylase/hydrolase 28 | AT1G14720 (1.00E-127) |
| Solyc03g033300.1 | ammonium transporter 2 | AT2G38290 (2.00E-149) |
| Solyc04g077580.2 | phytosulfokine 4 precursor | |
| Solyc05g007570.2 | Protein of unknown function (DUF1666) | AT5G39785 (5.00E-76) |
| Solyc05g054590.2 | UDP-XYL synthase 6 | AT2G28760 (3.00E-151) |
| Solyc06g053610.2 | myb domain protein 15 | AT3G23250 (5.00E-68) |
| Solyc10g055370.1 | Glycosyl hydrolase family 10 protein | AT4G38650 (1.00E-171) |
| Solyc12g100120.1 | Putative glycosyl hydrolase of unknown function (DUF1680) | AT5G12950 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000016 | transmembrane transport membrane integral to membrane pectate lyase activity cation transport solute:hydrogen antiporter activity protein phosphorylation protein kinase activity exocytosis phospholipid binding response to stress vesicle docking enzyme inhibitor activity PPC:5.2.1: Other Kinase Transcription factor: LIM nutrient reservoir activity cell wall transferase activity, transferring glycosyl groups cell wall modification pectinesterase activity Pentose_and_glucuronate_interconversions non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | details |
| CFinderADM000344 | ammonium_transmembrane_transport ammonium_transport ammonium transmembrane transporter activity amino acid binding metabolic process vitamin E biosynthesis (tocotrienols) vitamin E biosynthesis (tocotrienols) valine biosynthesis Ubiquinone_and_other_terpenoid-quinone_biosynthesis Pantothenate_and_CoA_biosynthesis | details |
| CFinderADM000412 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity NADPH_binding terpenoid biosynthetic process metabolic process Transcription regulator: ARF methylerythritol phosphate pathway II vitamin E biosynthesis (tocotrienols) vitamin E biosynthesis (tocotrienols) methylerythritol phosphate pathway I valine biosynthesis phospholipid remodeling (phosphatidylcholine, yeast) CDP-diacylglycerol biosynthesis I cellulose biosynthesis Terpenoid_backbone_biosynthesis Ether_lipid_metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |