CFinderADM000472 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| cell wall | 0.020213168 | GO:0005618 |
| 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 0.025192495 | GO:0003854 |
| pectinesterase activity | 0.025192495 | GO:0030599 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.025192495 | GO:0016616 |
| steroid biosynthetic process | 0.035062917 | GO:0006694 |
| cell wall modification | 0.037788742 | GO:0042545 |
| UDP-D-xylose biosynthesis | 0.026848253 | plantCyc |
| gluconeogenesis I | 0.026848253 | plantCyc |
| TCA cycle variation V (plant) | 0.026848253 | plantCyc |
| homogalacturonan degradation | 0.026848253 | plantCyc |
| hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | 0.012032346 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc03g116400.2 | late embryogenesis abundant protein-related / LEA protein-related | |
| Solyc04g045390.1 | ||
| Solyc05g052120.2 | Pectin lyase-like superfamily protein | AT1G69940 (2.00E-108) |
| Solyc10g018920.1 | PLAC8 family protein | AT2G45010 (3.00E-76) |
| Solyc12g044630.1 | profilin 5 | AT4G29340 (1.00E-53) |
| Solyc12g099480.1 | UDP-xylose synthase 4 | AT2G47650 (4.00E-179) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000016 | transmembrane transport membrane integral to membrane pectate lyase activity cation transport solute:hydrogen antiporter activity protein phosphorylation protein kinase activity exocytosis phospholipid binding response to stress vesicle docking enzyme inhibitor activity PPC:5.2.1: Other Kinase Transcription factor: LIM nutrient reservoir activity cell wall transferase activity, transferring glycosyl groups cell wall modification pectinesterase activity Pentose_and_glucuronate_interconversions non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | details |
| CFinderADM000612 | eukaryotic translation initiation factor 3 complex cellulose biosynthetic process intramolecular transferase activity polygalacturonase activity translation initiation factor activity cytoplasm TCA cycle variation V (plant) gluconeogenesis I homogalacturonan degradation triacylglycerol degradation formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 | details |
Expression profiles
 Show details about module gene expression profiling |