CFinderADM000531 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| ribosomal_large_subunit_biogenesis | 0.000950037 | GO:0042273 |
| ribosomal_large_subunit_export_from_nucleus | 0.000950037 | GO:0000055 |
| actin cytoskeleton organization | 0.001266533 | GO:0030036 |
| E3 adaptor: DWD | 0.036740494 | gene family |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g006090.2 | rRNA processing protein-related | AT3G22660 (5.00E-67) |
| Solyc01g006170.2 | rRNA processing protein-related | AT3G22660 (2.00E-69) |
| Solyc02g069770.2 | Transducin/WD40 repeat-like superfamily protein | AT4G05410 (7.00E-138) |
| Solyc02g081660.2 | GTP-binding family protein | AT1G30960 (4.00E-128) |
| Solyc02g081680.2 | Noc2p family | AT2G18220 (0) |
| Solyc12g099890.1 | ARM repeat superfamily protein | AT1G13160 (7.00E-176) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000447 | RNA binding eukaryotic translation initiation factor 2 complex seryl-tRNA aminoacylation tRNA charging | details |
| CFinderADM000792 | ribosomal_large_subunit_biogenesis ribosomal_large_subunit_export_from_nucleus actin cytoskeleton organization RNA binding GTP binding Herpes_simplex_infection | details |
| CFinderADM001043 | seryl-tRNA aminoacylation tRNA aminoacylation for protein translation serine-tRNA ligase activity cytoplasm E3 adaptor: DWD tRNA charging Herpes_simplex_infection Aminoacyl-tRNA_biosynthesis | details |
Expression profiles
 Show details about module gene expression profiling |