CFinderADM000641 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| proteolysis involved in cellular protein catabolic process | 1.72E-05 | GO:0051603 |
| proteasome core complex | 1.72E-05 | GO:0005839 |
| threonine-type endopeptidase activity | 3.15E-05 | GO:0004298 |
| proteasome core complex, alpha-subunit complex | 0.002848264 | GO:0019773 |
| endopeptidase activity | 0.005221818 | GO:0004175 |
| ubiquitin-dependent protein catabolic process | 0.021380377 | GO:0006511 |
| Proteasome | 1.93E-05 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g111450.2 | proteasome alpha subunit D2 | AT3G51260 (7.00E-119) |
| Solyc02g070630.2 | Ribosomal protein L18ae family | AT1G17080 (4.00E-30) |
| Solyc04g012040.2 | 26S proteasome regulatory subunit, putative (RPN5) | AT5G09900 (0) |
| Solyc05g010290.1 | AT3G25545 (2.00E-62) | |
| Solyc05g053140.2 | Proteasome component (PCI) domain protein | AT4G19006 (1.00E-180) |
| Solyc07g016200.2 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | AT4G31300 (4.00E-110) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000277 | tRNA aminoacylation tRNA binding cytoplasm aminoacyl-tRNA ligase activity tRNA charging Aminoacyl-tRNA_biosynthesis | details |
| CFinderADM000538 | microtubule_severing spindle pole microtubule organizing center katanin_complex microtubule cytoskeleton organization E3 adaptor: DWD microtubule binding Homologous_recombination | details |
| CFinderADM000640 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity mitochondrial inner membrane presequence translocase complex Proteasome | details |
| CFinderADM000646 | proteasome core complex, alpha-subunit complex proteasome core complex phosphatidylinositol phospholipase C activity endopeptidase activity threonine-type endopeptidase activity proteolysis involved in cellular protein catabolic process intracellular_signal_transduction D-myo-inositol-5-phosphate metabolism D-myo-inositol (1,4,5)-trisphosphate biosynthesis phosphatidate metabolism, as a signaling molecule phospholipases Proteasome | details |
| CFinderADM000750 | chromosome DNA topological change DNA topoisomerase activity DNA topoisomerase type I activity RNA methyltransferase activity RNA processing metalloendopeptidase activity Fanconi_anemia_pathway | details |
| CFinderADM000877 | HAUS_complex cytoskeleton microtubule organizing center spindle pole centrosome organization spindle_assembly microtubule cytoskeleton organization microtubule-based movement kinesin complex Lysosome hydrolysis and/or rearrangement of glycosidic bonds Glycoside Hydrolases GH89 adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM48 | details |
| CFinderADM000978 | glutathione biosynthetic process glutathione synthase activity glutathione biosynthesis starch biosynthesis Glutathione_metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001163 | phosphatidylinositol phospholipase C activity Transcription factor: MYB-RELATED intracellular_signal_transduction nucleosome assembly nucleosome signal transduction lipid metabolic process D-myo-inositol-5-phosphate metabolism D-myo-inositol (1,4,5)-trisphosphate biosynthesis phosphatidate metabolism, as a signaling molecule phospholipases | details |
| CFinderADM001268 | ATP phosphoribosyltransferase activity histidine biosynthetic process cytoplasm histidine biosynthesis Histidine_metabolism | details |
Expression profiles
 Show details about module gene expression profiling |