CFinderADM000691 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| clathrin coat of trans-Golgi network vesicle | 0.003798506 | GO:0030130 |
| clathrin coat of coated pit | 0.003798506 | GO:0030132 |
| peroxiredoxin activity | 0.012538679 | GO:0051920 |
| phosphate-containing compound metabolic process | 0.015769555 | GO:0006796 |
| structural molecule activity | 0.018789075 | GO:0005198 |
| inorganic diphosphatase activity | 0.018789075 | GO:0004427 |
| cytoplasm | 0.049167155 | GO:0005737 |
| L-ascorbate degradation V | 0.005696529 | plantCyc |
| ascorbate glutathione cycle | 0.00595032 | plantCyc |
| Apoptosis_-_fly | 0.007597012 | KEGG |
| Glutathione_metabolism | 0.015464863 | KEGG |
| Oxidative_phosphorylation | 0.015464863 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g106430.2 | pyrophosphorylase 6 | AT5G09650 (4.00E-125) |
| Solyc04g014250.2 | GRAM domain family protein | AT2G22475 (6.00E-98) |
| Solyc04g074640.2 | ascorbate peroxidase 4 | AT4G09010 (3.00E-129) |
| Solyc08g061810.2 | AT2G26340 (5.00E-30) | |
| Solyc09g014450.2 | Clathrin light chain protein | AT3G51890 (3.00E-40) |
| Solyc10g082030.1 | 2-cysteine peroxiredoxin B | AT5G06290 (8.00E-111) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000757 | peroxiredoxin activity cyclic-nucleotide phosphodiesterase activity oxygen evolving complex extrinsic to membrane photosystem II arginine degradation VI (arginase 2 pathway) L-Nδ-acetylornithine biosynthesis L-ascorbate degradation V arginine degradation I (arginase pathway) putrescine biosynthesis IV ascorbate glutathione cycle Amoebiasis Apoptosis_-_fly Glutathione_metabolism | details |
| CFinderADM000902 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor NAD binding carboxylic acid metabolic process aspartate degradation II glyoxylate cycle photorespiration TCA cycle variation V (plant) TCA cycle II (plants and fungi) gluconeogenesis I Proximal_tubule_bicarbonate_reclamation Glycine,_serine_and_threonine_metabolism | details |
| CFinderADM000963 | phosphate-containing compound metabolic process inorganic diphosphatase activity cytoplasm Oxidative_phosphorylation | details |
| CFinderADM000990 | intracellular protein transport | details |
| CFinderADM001111 | peroxiredoxin activity oxidation-reduction process response to oxidative stress L-ascorbate degradation V ascorbate glutathione cycle Apoptosis_-_fly Glutathione_metabolism | details |
| CFinderADM001172 | PPC:1.6.2: Plant External Response Like Kinase UTP biosynthetic process phosphate-containing compound metabolic process CTP biosynthetic process nucleoside_diphosphate_phosphorylation GTP biosynthetic process inorganic diphosphatase activity nucleoside diphosphate kinase activity cytoplasm pyrimidine deoxyribonucleotide phosphorylation cis-vaccenate biosynthesis purine deoxyribonucleosides salvage CMP phosphorylation 3-phosphoinositide biosynthesis Regulation_of_actin_cytoskeleton Biotin_metabolism Oxidative_phosphorylation MAPK_signaling_pathway_-_plant Endocrine_resistance adenosine deoxyribonucleotides de novo biosynthesis UTP and CTP de novo biosynthesis guanosine ribonucleotides de novo biosynthesis pyrimidine deoxyribonucleotides de novo biosynthesis II guanosine deoxyribonucleotides de novo biosynthesis I superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) pyrimidine deoxyribonucleotides de novo biosynthesis I | details |
| CFinderADM001322 | clathrin coat of coated pit clathrin coat of trans-Golgi network vesicle protein kinase C-activating G-protein coupled receptor signaling pathway phosphate-containing compound metabolic process intracellular_signal_transduction peroxiredoxin activity structural molecule activity diacylglycerol kinase activity inorganic diphosphatase activity kinase activity L-ascorbate degradation V ascorbate glutathione cycle phosphatidate metabolism, as a signaling molecule Apoptosis_-_fly Oxidative_phosphorylation Glutathione_metabolism Choline_metabolism_in_cancer | details |
| CFinderADM001337 | oxygen evolving complex extrinsic to membrane photosystem II peroxiredoxin activity L-ascorbate degradation V ascorbate glutathione cycle photosynthesis light reactions Apoptosis_-_fly Photosynthesis Glutathione_metabolism | details |
Expression profiles
 Show details about module gene expression profiling |