CFinderADM000902 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.000357494 | GO:0016616 |
| NAD binding | 0.032148179 | GO:0051287 |
| carboxylic acid metabolic process | 0.03978683 | GO:0019752 |
| aspartate degradation II | 0.019437712 | plantCyc |
| glyoxylate cycle | 0.019437712 | plantCyc |
| photorespiration | 0.019437712 | plantCyc |
| TCA cycle variation V (plant) | 0.022782083 | plantCyc |
| TCA cycle II (plants and fungi) | 0.022782083 | plantCyc |
| gluconeogenesis I | 0.030736008 | plantCyc |
| Proximal_tubule_bicarbonate_reclamation | 0.006731292 | KEGG |
| Glycine,_serine_and_threonine_metabolism | 0.009820356 | KEGG |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g106480.2 | peroxisomal NAD-malate dehydrogenase 1 | AT2G22780 (2.00E-170) |
| Solyc01g111630.2 | hydroxypyruvate reductase | AT1G68010 (0) |
| Solyc04g014250.2 | GRAM domain family protein | AT2G22475 (6.00E-98) |
| Solyc04g056580.2 | Uncharacterized conserved protein (DUF2358) | AT1G65230 (9.00E-94) |
| Solyc08g080050.2 | PGR5-LIKE A | AT4G22890 (1.00E-102) |
| Solyc12g007010.1 | ATP binding | AT3G24430 (0) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000676 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Transcription factor: G2-like GTPase activator activity photorespiration glycine biosynthesis III glyoxylate cycle aspartate degradation II glycine biosynthesis TCA cycle II (plants and fungi) TCA cycle variation V (plant) Proximal_tubule_bicarbonate_reclamation Glycine,_serine_and_threonine_metabolism Peroxisome | details |
| CFinderADM000691 | clathrin coat of trans-Golgi network vesicle clathrin coat of coated pit peroxiredoxin activity phosphate-containing compound metabolic process structural molecule activity inorganic diphosphatase activity cytoplasm L-ascorbate degradation V ascorbate glutathione cycle Apoptosis_-_fly Glutathione_metabolism Oxidative_phosphorylation | details |
| CFinderADM000984 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on the CH-NH2 group of donors glutamate synthase activity oxidation-reduction process glutamate biosynthetic process oxidoreductase activity nitrogen compound metabolic process metabolic process metalloendopeptidase activity carboxylic acid metabolic process NAD binding vesicle-mediated transport glutamate biosynthesis V glutamine degradation I ammonia assimilation cycle II photorespiration aspartate degradation II glyoxylate cycle glutamine biosynthesis III TCA cycle II (plants and fungi) TCA cycle variation V (plant) gluconeogenesis I Nitrogen_metabolism Proximal_tubule_bicarbonate_reclamation Glycine,_serine_and_threonine_metabolism | details |
| CFinderADM000990 | intracellular protein transport | details |
Expression profiles
 Show details about module gene expression profiling |