CFinderADM000769 module
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Protein:Yellow color--query protein Green color--interaction proteins.
Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontology |
|---|---|---|
| purine nucleotide biosynthetic process | 0.005698579 | GO:0006164 |
| adenylosuccinate synthase activity | 0.007617019 | GO:0004019 |
| RNA methyltransferase activity | 0.020293052 | GO:0008173 |
| protein folding | 0.033005727 | GO:0006457 |
| RNA processing | 0.033005727 | GO:0006396 |
| Alanine,_aspartate_and_glutamate_metabolism | 0.01138404 | KEGG |
| ABC_transporters | 0.014453369 | KEGG |
| adenosine ribonucleotides de novo biosynthesis | 0.010492123 | plantCyc |
Module member annotation
| Gene ID | Annotation | Ortholog in Arabidopsis (Blast e-value) |
|---|---|---|
| Solyc01g086900.2 | AGAMOUS-like 26 | AT5G26880 (3.00E-82) |
| Solyc02g085520.2 | adenylosuccinate synthase | AT3G57610 (0) |
| Solyc03g098640.2 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | AT5G19750 (1.00E-65) |
| Solyc07g049230.1 | RmlC-like cupins superfamily protein | AT2G32650 (3.00E-49) |
| Solyc11g069260.1 | ABC transporter family protein | AT4G33460 (8.00E-84) |
| Solyc12g009250.1 | chaperonin 20 | AT5G20720 (9.00E-82) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000969 | Transcription factor: WHIRLY rRNA methylation superoxide metabolic process superoxide dismutase activity RNA methyltransferase activity cytoplasm reactive oxygen species degradation (mammalian) superoxide radicals degradation pyrimidine deoxyribonucleosides salvage purine deoxyribonucleosides salvage Prion_diseases Pyrimidine_metabolism Flavonoid_biosynthesis | details |
| CFinderADM000985 | RNA methyltransferase activity RNA processing porphobilinogen synthase activity adenylosuccinate synthase activity rRNA methylation purine nucleotide biosynthetic process tetrapyrrole biosynthetic process GTP binding RNA binding phosphatidylinositol phosphorylation transferase activity, transferring acyl groups D-myo-inositol (1,4,5)-trisphosphate degradation myo-inositol biosynthesis tetrapyrrole biosynthesis I (from glutamate) phytate degradation I CDP-diacylglycerol biosynthesis I RNA_transport Alanine,_aspartate_and_glutamate_metabolism Fat_digestion_and_absorption Porphyrin_and_chlorophyll_metabolism | details |
Expression profiles
 Show details about module gene expression profiling |